LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu04g00303	ATGAGGTTTTTTATTTCTGCTATTTGTGTTCTTGTGCTATTCTCCTATGCTGGAGTTGCTTATGATCATAATTTGGACCCAAATGCAAACATAACAATCAAATGGGATGTGATTCAGTGGACACCAGATGGTTATGTGGCGTCGGTAACACTCAACAATTTCCAAAAGTTTCGCCAAATAGCGAAACCAGGATGGAAATTAAACTGGACATGGACTAATAAAGAAGTGATATGGAATATATTAGGAGCTCAAACAATAGAGCAAGGAGGCTGTTCTAGGTTCAAAGGTAACAAACCTGTTTTCTGCAAGAAAATCCCTGTTGTTGTAGATCGTCTCCCTGGTGTACCGATCAATCAACAAGTCGCAAACTGTTGTAGAGGTGGCGTGGTTGCTGCATTAGGACAATCAGCCTTTCAAATTACTGTAGGAGAAGCTGGTAACACAGTCAAAACAGTTAGACTTCCACAGAATTTCACTCTTTTGGCTCCAGGAGCTGGATATACTTGTGGCGCTACAAGGATTGTTCCTTCTACCATTTTTATTACTCCGCGCGGCAAGATTCCAGTTTGGATGACATGGGAGGCTATCTGCAAATACTCACAAAGTTGA	609	0.4122	MRFFISAICVLVLFSYAGVAYDHNLDPNANITIKWDVIQWTPDGYVASVTLNNFQKFRQIAKPGWKLNWTWTNKEVIWNILGAQTIEQGGCSRFKGNKPVFCKKIPVVVDRLPGVPINQQVANCCRGGVVAALGQSAFQITVGEAGNTVKTVRLPQNFTLLAPGAGYTCGATRIVPSTIFITPRGKIPVWMTWEAICKYSQS	202

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu04g00303	202	Pfam	COBRA-like protein	45	200	IPR006918	GO:0010215\|GO:0031225
	Tsu04g00303	202	PANTHER	PROTEIN COBRA	8	201	IPR006918	GO:0010215\|GO:0031225

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu04g00303	Tsu-Chr4	2736505	2737779	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu04g00303	1	201	COBRA Gene Family	AT5G15630	57.895	5.24e-81	243

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu04g00303	-		-	gmx:100783410	281.182

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