Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00303 ATGAGGTTTTTTATTTCTGCTATTTGTGTTCTTGTGCTATTCTCCTATGCTGGAGTTGCTTATGATCATAATTTGGACCCAAATGCAAACATAACAATCAAATGGGATGTGATTCAGTGGACACCAGATGGTTATGTGGCGTCGGTAACACTCAACAATTTCCAAAAGTTTCGCCAAATAGCGAAACCAGGATGGAAATTAAACTGGACATGGACTAATAAAGAAGTGATATGGAATATATTAGGAGCTCAAACAATAGAGCAAGGAGGCTGTTCTAGGTTCAAAGGTAACAAACCTGTTTTCTGCAAGAAAATCCCTGTTGTTGTAGATCGTCTCCCTGGTGTACCGATCAATCAACAAGTCGCAAACTGTTGTAGAGGTGGCGTGGTTGCTGCATTAGGACAATCAGCCTTTCAAATTACTGTAGGAGAAGCTGGTAACACAGTCAAAACAGTTAGACTTCCACAGAATTTCACTCTTTTGGCTCCAGGAGCTGGATATACTTGTGGCGCTACAAGGATTGTTCCTTCTACCATTTTTATTACTCCGCGCGGCAAGATTCCAGTTTGGATGACATGGGAGGCTATCTGCAAATACTCACAAAGTTGA 609 0.4122 MRFFISAICVLVLFSYAGVAYDHNLDPNANITIKWDVIQWTPDGYVASVTLNNFQKFRQIAKPGWKLNWTWTNKEVIWNILGAQTIEQGGCSRFKGNKPVFCKKIPVVVDRLPGVPINQQVANCCRGGVVAALGQSAFQITVGEAGNTVKTVRLPQNFTLLAPGAGYTCGATRIVPSTIFITPRGKIPVWMTWEAICKYSQS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00303 202 Pfam COBRA-like protein 45 200 IPR006918 GO:0010215|GO:0031225
Tsu04g00303 202 PANTHER PROTEIN COBRA 8 201 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00303 Tsu-Chr4 2736505 2737779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00303 1 201 COBRA Gene Family AT5G15630 57.895 5.24e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00303 - - gmx:100783410 281.182