Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g00302 | ATGGGTTCTATTTGTTCTTGTTTGAgtgttgttgattttgaagaTTATGCGAATCCACATAGTCATGTATATAGGAACTGCGTGTGCGGCGGTTGCTTCGTACAAAACCTTTTGGCTGTTTATGCATCAATATTCCGGAGAGGGGAAATGCAGCCGCTTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCTACCGCATCACTTGATAATTCTCTATCCGACATATACCGCTCTCCTCCAAGGCCGTTGCCTTATGATGTAGATCCTAGGCATTTCCGCTCACAGCACGACGGACTAGTTTCAAGACGTGAAAAGGGTTCCAGTCATTTGAATGAGGAGTCAGAACCTCTTAGGGGTGATTTGGATGTAGATTCAGAACCTATGAACTCGAGTGGTAAATGGAACGAATCCACTGGCAAAGATGGGTCAAAGGAATACCGTTCGAAGTCCACAGTAAGACTTTCGTCAGCAAAACCTACAACTGGAGCTGAGATTGTGTACGCATCATCAGAAGAAGAGGATGTTTGTCCAACTTGTCTTGAagAATACACTGAAGAGAATCCGAAGATAGTGACAAAATGTTCTCATCATTATCATCTTGGTTGCATATACGAGTGGATGGAGAGAAGTGACACCTGTCCTGTTTGTGGGAAGgtgATGCTATTCGATGAAACGCTTTAA | 684 | 0.424 | MGSICSCLSVVDFEDYANPHSHVYRNCVCGGCFVQNLLAVYASIFRRGEMQPLPSSIQGAASMTSTASLDNSLSDIYRSPPRPLPYDVDPRHFRSQHDGLVSRREKGSSHLNEESEPLRGDLDVDSEPMNSSGKWNESTGKDGSKEYRSKSTVRLSSAKPTTGAEIVYASSEEEDVCPTCLEEYTEENPKIVTKCSHHYHLGCIYEWMERSDTCPVCGKVMLFDETL | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g00302 | 227 | Pfam | RING-H2 zinc finger domain | 172 | 217 | IPR024766 | GO:0008270 | |
Tsu04g00302 | 227 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 226 | - | - | |
Tsu04g00302 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 163 | 226 | IPR013083 | - | |
Tsu04g00302 | 227 | SUPERFAMILY | RING/U-box | 172 | 223 | - | - | |
Tsu04g00302 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 177 | 217 | IPR001841 | - | |
Tsu04g00302 | 227 | MobiDBLite | consensus disorder prediction | 72 | 156 | - | - | |
Tsu04g00302 | 227 | SMART | ring_2 | 177 | 217 | IPR001841 | - | |
Tsu04g00302 | 227 | MobiDBLite | consensus disorder prediction | 85 | 123 | - | - | |
Tsu04g00302 | 227 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g00302 | Tsu-Chr4 | 2730889 | 2735540 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g00302 | 1 | 226 | C3H Transcription Factor Family | AT5G15790 | 57.576 | 1.36e-91 | 267 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g00302 | - | - | gmx:100788192 | 394.43 |