Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00284 ATGCTTGCAAAATATTCAAAGAATAAAAGTTCATCCAAGAAACAATACTCAACAATTATAGAAGAGCTATGCCATCAATTTTCTTTGGAGGATCTTAAGCAATCAACCAATAACTTTGATGAAGTTCGAATAATTAGAAAATCACCATTCAGTATAGGGTACAAAGGTTATCTCAAACATAATGGTGAAATTGATTATCCGATAGCATTGAAGCGGATGAGAAATATATCAGACGAATGGAAGTTCAAGAAGGAAATTGAACTCCACTGCCAGCTTCATCACCCAAATTTGACATCTTTTATAGGATTTTGTGACCAAAAAGATGAGAAAATTCTCGTGTATGACATGTTAAATGGAACTCTCTATGATCATTTACGTTCTAGAGATATGGAATCGTTGTCATGGAAGAAAAGGCTTGAAATATGCATCGGAGCTGCAAGAGGTCTACACTATCTACACACCGGAGCAAAGCGCACAATTTTTCATTGTGACATAAAGCCTCAAACTATTCTATTAGATAACAATATGGTACCAAAACTCTCGCATCTCGGATTTTCCTTGCAAGGGAAGCTTTCAAAATCGAAGCCTAAATCAATTAAAGTTGACATCCTTATTgGTACATTGTTTTACATGGCACCAGAGTATGTCCGAACGAGTACTTTCACAGATAAATGCGACGTTTACTCCTTTGGTATGGTTCTACTTGAAGTAGCATGCACAAACTACAACCTCACCATCTTTGATAAGATGAAAATGTTAGAGAACCCAAATTTGTTTATAGAAAAGTCAATTGAAGCAGCTAACTTTTTGGAGAAGTTCTCAGCTAATGAGATTATTGATCCCATTCTCATGAGATTGATTGCACCAAAATGTTTGGTGGTGTTCATGGATATCATGAAAAGATGTTTGAATATAGAACCAAATGAAAGACCCATAATAGGAGAGGTTGAGGTTGAACTTGAGCATGCTCTGGCACTCCAGAAGGAAGCAGATGATGGGAAAAGTAATGGTGATTATAACTTTTCCCTCACAACCATTCCTATCTAA 1047 0.361 MLAKYSKNKSSSKKQYSTIIEELCHQFSLEDLKQSTNNFDEVRIIRKSPFSIGYKGYLKHNGEIDYPIALKRMRNISDEWKFKKEIELHCQLHHPNLTSFIGFCDQKDEKILVYDMLNGTLYDHLRSRDMESLSWKKRLEICIGAARGLHYLHTGAKRTIFHCDIKPQTILLDNNMVPKLSHLGFSLQGKLSKSKPKSIKVDILIGTLFYMAPEYVRTSTFTDKCDVYSFGMVLLEVACTNYNLTIFDKMKMLENPNLFIEKSIEAANFLEKFSANEIIDPILMRLIAPKCLVVFMDIMKRCLNIEPNERPIIGEVEVELEHALALQKEADDGKSNGDYNFSLTTIPI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00284 348 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00284 348 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Tsu04g00284 348 PANTHER OS07G0166700 PROTEIN 10 342 IPR045272 GO:0004714|GO:0006468
Tsu04g00284 348 SUPERFAMILY Protein kinase-like (PK-like) 12 318 IPR011009 -
Tsu04g00284 348 Gene3D Transferase(Phosphotransferase) domain 1 117 342 - -
Tsu04g00284 348 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 342 - -
Tsu04g00284 348 Pfam Protein kinase domain 65 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00284 Tsu-Chr4 2569172 2570299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00284 9 332 Receptor kinase-like Gene Family AT3G51550 40.000 8.56e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00284 Pkinase 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00284 - - mtr:MTR_7g015750 486.108