Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00283 ATGTTTCTCAAATATTTGGGTTTCCACCATTGGACATGGAAGCATAGGATGCACAATCCAATAGTAATAGAAGAGTTATgccatcaattttctctagccAGAATTAAGAAATCGACCAACAACTTCGATAAAAATCGAATAATTGGAAGTGGGAGTTTAGGTATAGTGTACAAAGGTTGTCTTCAATTACATAACGATACTATTGATTCTACGGTTATAATCAAACGAGTTTATCCTATTACAGACAAAAAATTAAGAGAGTTTAGGAATGAAATTGAGTTGCTATGCCAACTTGATCATCCAAATTTGGTCAATTTATTAGGATATTGTGACCACAAAAACGAGAAGATTATTGTGTATGACTACAACTCCAATGGATCTCTCTATAATCTCCTTTGTTGTAAACATAGTAGCATGAAACCTCTTACATGGAAACAAAGACTAAAGATATGCATAGGAGTAGCATGTGGACTACACTATCTTCATACAGGAACTAAACGCACCATCTTTCATTGTGACATTCAATCTCATAAAATTTTATTGGATAGCAATATGGTGCCTAAACTCTCGGATTTTTGGATTTCCTTGCAAGGTCCTTTGTTTACTTCAATGCCAAAACCAAAGTCCATATTAAATGATAACATTGTTGGTTCATATGGTTATGTGGCTCCTGAGATTTTAGAAAACAATAAAGCAACATATAAGTGTGACGCTTACTCCTTTGGTATACTTCTACTAGAAGTGCTATGTTGGGAAAAGTTAGAAAATGTTAAGGGAAAGGGACTCCCAATCGAAGATAATATTGATGAGAATATAAAAGGAAACATTGCACCAGAATGTTGGGAAATATTTGTGGATGTAACAAAAAGATGTTTAAAGTATGATCCAAATGAACGACCAACGATGGGTGAAGTCGAGGTGCAACTTGAACTTGCTCTATCACTGCAGGAAAAAGCGGATAATAACAAAAACACCAACGTTGATGATGATCATTATACACTATCATCTACAACCATTATTGATGAATGA 1029 0.3362 MFLKYLGFHHWTWKHRMHNPIVIEELCHQFSLARIKKSTNNFDKNRIIGSGSLGIVYKGCLQLHNDTIDSTVIIKRVYPITDKKLREFRNEIELLCQLDHPNLVNLLGYCDHKNEKIIVYDYNSNGSLYNLLCCKHSSMKPLTWKQRLKICIGVACGLHYLHTGTKRTIFHCDIQSHKILLDSNMVPKLSDFWISLQGPLFTSMPKPKSILNDNIVGSYGYVAPEILENNKATYKCDAYSFGILLLEVLCWEKLENVKGKGLPIEDNIDENIKGNIAPECWEIFVDVTKRCLKYDPNERPTMGEVEVQLELALSLQEKADNNKNTNVDDDHYTLSSTTIIDE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00283 342 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 325 - -
Tsu04g00283 342 PANTHER OS07G0166700 PROTEIN 18 325 IPR045272 GO:0004714|GO:0006468
Tsu04g00283 342 Gene3D Transferase(Phosphotransferase) domain 1 124 337 - -
Tsu04g00283 342 ProSiteProfiles Protein kinase domain profile. 42 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00283 342 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Tsu04g00283 342 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
Tsu04g00283 342 Pfam Protein tyrosine and serine/threonine kinase 45 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00283 Tsu-Chr4 2566920 2568904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00283 26 322 Receptor kinase-like Gene Family AT3G51550 40.446 1.06e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00283 PK_Tyr_Ser-Thr 8.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00283 - - gmx:100779112 423.32