Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00282 ATGCTTGTAAAATATTCTAAGCATAAAAGTTCATCTAAGAAACAATATCCAACAGTTATAGAAGAGCTATGCCATCAATTTTCTCTGGAAGATTTGAAGAAATCGACCAATAACTTTGATGAAGATCGAATAATTGGACAAACAGAATTCAGTATAGTGTACAAAGGTTATCTCAAACATAAAGGTGAAACTGATTATCTAATTGCACTGAAACGGATGAGAAATATATTTGACGATTGGAAGTTCAAGAAGGAAATTGAACTTCACTGCCAGCTTCATCACCCGAATTTGACATCTTTAATAGGATTCTGTGACGAAAAAGATGAGAAAATTATCGTGTATGAATACATGTTAAATGGCTCTCTCTATAATCATTTACGTTTAAGGGATATGGATCCACTCTCATGGAAGAAAAGGCTTGAAATATGCATCGGAGCTGCAAAAGGATTACACTACCTTCACACTGGAGCAAAGCGTGCGATTTTTCACTGTGACATAAAGCCTCAAACCATTCTTTTAGATAATAGTATGGTACCAAAACTCTCGCATCTTGGATTTTCCTTACAAGGGAATCTTTCTAAATCGAAGCCAAAACCAATTAAAGTCGACATCATTGGTGGTACATTTATGGCGCCAGAGTGTCTCTTAACCAATACTTTCACAGACAAATGTGACGTTTACTCCTTTGGTATAGTTCTACTTGAAGTAGCATGCACAAGCTACAAGAATACCATCTTTGATAAGATGGTCATGTTAGAGGACACAAATTGGTTTACAAATCAGTCATTTAATCCAGCTAACTTTTTGGAGAAGTTCTCAGCTAATGAGATTATTGATCCCATTCTCATGAGATTGATTGCACCAAAATGTTTGGTAGTGTTCATGGATATCACGAAAAGATGCTTGAATATAGAACCAAATGAAAGACCAACAATGGGCGAGGTTGAGGTTGAACTTGAGCATGCTTTGGCACTGCAGCAGGAAGCATGA 990 0.3646 MLVKYSKHKSSSKKQYPTVIEELCHQFSLEDLKKSTNNFDEDRIIGQTEFSIVYKGYLKHKGETDYLIALKRMRNIFDDWKFKKEIELHCQLHHPNLTSLIGFCDEKDEKIIVYEYMLNGSLYNHLRLRDMDPLSWKKRLEICIGAAKGLHYLHTGAKRAIFHCDIKPQTILLDNSMVPKLSHLGFSLQGNLSKSKPKPIKVDIIGGTFMAPECLLTNTFTDKCDVYSFGIVLLEVACTSYKNTIFDKMVMLEDTNWFTNQSFNPANFLEKFSANEIIDPILMRLIAPKCLVVFMDITKRCLNIEPNERPTMGEVEVELEHALALQQEA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00282 329 ProSiteProfiles Protein kinase domain profile. 39 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00282 329 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Tsu04g00282 329 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 329 - -
Tsu04g00282 329 PANTHER OS07G0166700 PROTEIN 10 329 IPR045272 GO:0004714|GO:0006468
Tsu04g00282 329 SUPERFAMILY Protein kinase-like (PK-like) 12 318 IPR011009 -
Tsu04g00282 329 Pfam Protein tyrosine and serine/threonine kinase 42 317 IPR001245 GO:0004672|GO:0006468
Tsu04g00282 329 Gene3D Transferase(Phosphotransferase) domain 1 117 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00282 Tsu-Chr4 2561465 2563107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00282 10 329 Receptor kinase-like Gene Family AT5G38990 41.033 5.06e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00282 PK_Tyr_Ser-Thr 4.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00282 - - mtr:MTR_7g015750 472.241