Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00274 ATGACCATACTATCTCTCATTTTCCTACTGTACCCTCCAGTTGCTAACTCATACATCCCGGATTACAATTTAGCTATCAATTGTGGCTCCTCCAGCGACACTACTACCTTAGGCAACCGAACTTGGGTTGGTGATAACTCCAATCTCTTTACTTTCATCCAACCAAAAACCACAAACCCATCTCTTAATTTACCTCCGAATTCCCTTCCAAATGCCCAAACTCCATACACAACTGCACGTGTCTCTCTCTCAAATTTCACATATTCTTTTCCTATCAACAACATCACTAATTCCCCTGTTTTTATTCGCCTTCATTTTTACCCAACTTCGTACCAAAACTTTGAACCTTCTAATGCATTTTTCTCCGTTACAGTAAACAACAATCTTACCCTTCTTAAAAACTTCAACCCGTCACTTTGGCAGCTTCAAGATGAGGAAAAAATCACGAAAGAGTATTGcatccaaatcaaaccaaatgaGAATTTGCTAAATATAACTTTCATTCCAAACAACATAAACACATCAAATGTTTATTATGCTTTCATTAACGGAATTGAAGTTGTGTCCATGCCACCTTTTCTCTATTACACTGATCTCACTGACACAAATTATAATATCAAATCAGTTGAATTTGACAGCAACCAATACCAATACCAATACCAAGTTCTTAGCGACAAAGCTTTGGAAATGGTTTATAGAGTGAATGTTGGTGATAATCAAGTTCCACCAAGTAATGATACAGGTATGTTTCGTAATTGGGATAATGATAATCATCTTTACTTGGAGAAACAATATCCACAAAGTGTATCAGCTGATTATGGAGGCCATCTGAACTATTTACACAATTCCATTCCAAATTACACTGCACCAGAAGTTGTATACTTAACTGCAAGAAGCTATGGAATGTATGTGAAAGAGGATTATAATGTAACTTGGAATTTTGAAGTTGATTCAGTTTTTACTTATATGGTAAGGTTACatttttgtgagtttgattgGCATATAGAGAAAGAAAATGATAGAATTTTTCAGATTTTCATAGATGATAAATTGGCTGAACCAGGCGCTGATATAATTTCATGGACTGTTATTCGTATGGTTCCTGTTCATAAGGATTATGTTGTGACTATGTACTCTCCGGACAGAAGCTCTCGAAGAGTTAAACTTTCAATCAAGCTTCAACGAGCATCAAAAACTATCCCAATGAAATATTATGATGTTACACTAAATGGAATCGAGATTTTCAAAATAAGTGACAATAACAATCTCGCTGGTTTAAATCCCGACAAACACATTTTATCATCTCCACAGCAAAAACCATTACAAAATCAAAAGTCAAAGTCAAAGAAGTCGACCATAACCATGGTTGTCGTGATTGGATTTTCATGTCTCTTGCTAGTATTTGTTGTGGGAATAATAGTGTTTCTtagaaggagaagaagataTGACTCTCAGCTTCAAATGCAAGAAAGTTCTTGGAAGACACAGAAAGAAGGTTCGTCAACTTTACCATCCCATTTGTGCCGCTATTTTACAATAGCGGAGATAAGAGCTGCTACAAACAactttgatgatatttttatcattggGGTTGGAGGGTTCGGCAATGTTTACAAAGGTTACATTGACGGAGTTATACCTGTTGCAATAAAACGTCTTAAACCAGGTTCTCAACAAGGTGTGAACGAGTTCATGAATGAGATCGAGCTGCTCTCTCAGCTTCGTCATATTCATTTGGTTTCCCTCATTGGATATTGCAACGAAGGTACAGAGATGATTCTCGTTTACGACTTCATGCAACGTGGCACTCTTTGTGAATATTTATATGGTTCAGATAACGAACATCTTACTTGGAAGCAAAGACTCGAGATTCTATTGGGTGCGGCGAGGGGATTACATTATCTTCATGCAGTGTTGTGTGCTAGACCACCTTTGGTTCGTTCTGCCGATAAGAAAAAATCAAGTTTGGTCATTTGGTTCCAAAGATGTTACAAGCAAGGTCTGATAGTTGAAGAATTGGTGGACCCGTTCATAAAGGATTCTATAACAGATGAGAGTTTGAAATGTTATTGTCAAATGGTATTGAGTTGTTTGCATGATGATGGAAATCAACGAATGTCGATGAGTGATGTGGTTGGGGCTTTAGAGTTTGCATTGCAGTTGGTAACGACTGAGGAGGATAGTAAGTTTACTGgaaccaaagaaaaagaaaaaagtgagcAAAGACTATTGTTGCCGCAATTTATGAGTGATGACGGTAGTGATGTGTGTTTCACGAGTAGTAGCGATGACTATGGATCCCATACCAGTACTAAGGACAGCACCATTTCAACCAGTACTGAAGGACAACCTATGTTATCTGCGACTGTGTTTTCCGAGATCGGAAATCCAAGAGCTCGATAG 2403 0.3616 MTILSLIFLLYPPVANSYIPDYNLAINCGSSSDTTTLGNRTWVGDNSNLFTFIQPKTTNPSLNLPPNSLPNAQTPYTTARVSLSNFTYSFPINNITNSPVFIRLHFYPTSYQNFEPSNAFFSVTVNNNLTLLKNFNPSLWQLQDEEKITKEYCIQIKPNENLLNITFIPNNINTSNVYYAFINGIEVVSMPPFLYYTDLTDTNYNIKSVEFDSNQYQYQYQVLSDKALEMVYRVNVGDNQVPPSNDTGMFRNWDNDNHLYLEKQYPQSVSADYGGHLNYLHNSIPNYTAPEVVYLTARSYGMYVKEDYNVTWNFEVDSVFTYMVRLHFCEFDWHIEKENDRIFQIFIDDKLAEPGADIISWTVIRMVPVHKDYVVTMYSPDRSSRRVKLSIKLQRASKTIPMKYYDVTLNGIEIFKISDNNNLAGLNPDKHILSSPQQKPLQNQKSKSKKSTITMVVVIGFSCLLLVFVVGIIVFLRRRRRYDSQLQMQESSWKTQKEGSSTLPSHLCRYFTIAEIRAATNNFDDIFIIGVGGFGNVYKGYIDGVIPVAIKRLKPGSQQGVNEFMNEIELLSQLRHIHLVSLIGYCNEGTEMILVYDFMQRGTLCEYLYGSDNEHLTWKQRLEILLGAARGLHYLHAVLCARPPLVRSADKKKSSLVIWFQRCYKQGLIVEELVDPFIKDSITDESLKCYCQMVLSCLHDDGNQRMSMSDVVGALEFALQLVTTEEDSKFTGTKEKEKSEQRLLLPQFMSDDGSDVCFTSSSDDYGSHTSTKDSTISTSTEGQPMLSATVFSEIGNPRAR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00274 800 PANTHER OS07G0166700 PROTEIN 16 637 IPR045272 GO:0004714|GO:0006468
Tsu04g00274 800 PANTHER OS07G0166700 PROTEIN 638 742 IPR045272 GO:0004714|GO:0006468
Tsu04g00274 800 Gene3D Transferase(Phosphotransferase) domain 1 639 734 - -
Tsu04g00274 800 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 16 637 - -
Tsu04g00274 800 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 638 742 - -
Tsu04g00274 800 CDD TM_EGFR-like 451 481 - -
Tsu04g00274 800 MobiDBLite consensus disorder prediction 760 800 - -
Tsu04g00274 800 Coils Coil 799 800 - -
Tsu04g00274 800 MobiDBLite consensus disorder prediction 760 790 - -
Tsu04g00274 800 SUPERFAMILY Protein kinase-like (PK-like) 499 636 IPR011009 -
Tsu04g00274 800 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00274 800 Gene3D Phosphorylase Kinase; domain 1 483 598 - -
Tsu04g00274 800 Gene3D - 226 418 - -
Tsu04g00274 800 Gene3D - 21 190 - -
Tsu04g00274 800 Pfam Protein tyrosine and serine/threonine kinase 529 638 IPR001245 GO:0004672|GO:0006468
Tsu04g00274 800 Gene3D Transferase(Phosphotransferase) domain 1 599 638 - -
Tsu04g00274 800 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Tsu04g00274 800 Pfam Malectin-like domain 26 417 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00274 Tsu-Chr4 2449977 2452602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00274 635 800 Receptor kinase-like Gene Family AT3G51550 33.523 3.11e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00274 Malectin_like 3.3e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00274 - - mtr:MTR_7g015420 859.366