Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00269 ATGACAAACTctataatcataaaaatttacaTGAAAATCACCCTACTATCTCTCATTTTGCTATTGTACCCTCTAGTTGCTAATTCATACAACCCAGATTACAATTTAGCCATCAATTGTGGCTCCTCAACAAACACTATTGCCTTAGATAATCGTCTTTGGGTTGGTGATGATGCTGCCTTCACTGAACCAAAAACCACAAACCCATCTTTTACTACACAACCGAATTCCCTCGCAAGTATTGGAATTCCATTCATAACAACAGCACGTGCCTCTCTCTCAAATTTCACATACTCATTTTCTAGCATCACTACTTCCCCTGTTTTTCTTCGCCTTCATTTTTACCCAACTTCTTATCCAAACTTTGAACTTTCTAATGCAATTTTTTCTGTTCAAGTAAACAACAACCTCACTCTTCTTAAAAACTTCAACTCTTCACTTTGGGCTAACGACAATCCAATCACCAAGGAATATTGCATCCAAGTCAAACCACATGAGAAGCTAAACATAACTTTCATTCCAATCAACATAAACCAATCACATCCTTCTTATGCTTTCATTAATGGAATTGAAGTTGTGTCTATGCCTTCTTATCTCTATTACACAAACTTCACTGATGGCCTAAGTTATCACTTAAAATCACTTGACACAGATGCCCAACCAGATTACcaacttcaaaacaacaaagctttgGAGATGGTTTATAGAGTCAACGTTGGTCAAAATCAAGTTGCACCAAATAAGGATACAGGTATGTTTCGTTTTTGGGATACCGATTATCCTCTTTACTTGAAGATACAATATTCACAAAGCATATCTAGTGGTTTTGGAGAACATCTTAACTATTTAAAAAACACCGTTCCTAATTACACTGCACCAGAAGATGTTTACTTAACTGGAAGAAGTTATGGAAAGGATGCCAAAGAGGATTATAATGTAACTTGGAGTTTTGAAGTTGAttctatttttacttatatGATAAGGTTACATTTTTGTGAGTTTGATCCGAAAATAACGAATATAGGTGATAGAGTCTTCCAGATTTTTATAGATGATATTTTGGCTGAAAATGGTGCTGATGTGTTTTCATGGAGTGATAGACAAATATTGGTTCCTGTTCATAAGGATTATGCTGTGACTATATATTCTCTGGAAGGAAGCTCTCAAATTGAAAGAGTTAATATTTCAATCAAGCTTCAACGCATGCCAAATAGTTCCATGCAAACAACAGCATATCAAGATGTCATATTGAATGGAATCGAGATTTTCAAGATAAGTGACAACAATAACAATCTTGCAGGAGTGAATCCCAAACATTTATCTCCAAACGAACCATTATCACCTAGTCCACAATCAAAGTCAAAGAACTCAACCATGCTAATTTTTATTGCAGTTGGAGTTTCATGTCTTTTGCTAGCATTTGTTACTACGGGAATAATAGTTTTTGTtagaaggagaagaagattTGAGTCTCATTTTGAAATGGATGAAATTTCATGGAAGACAAAGAAAGAAGGTTCGTCGACTTTACCATCCCATTTGTGTCGCTATTTTACAATAGCTGAGATAAAAGCTGCTACAAACAactttgatgatatttttatcatCGGGGTTGGAGGGTTTGGCAACGTGTACAAAGGTTACATCGATGAAGTTACGCCTGTTGCAATAAAACGCCTTAAACCAGGTTCTCAGCAAGGTGTAAACGAGTTCATGAATGAGATTGAGTTGCTCTCTCAACTTCGTCATATTCATTTGGTTTCCCTCATTGGATATTGCAACGAAGGTGCAGAGATGATTCTCGTTTACGACTTCATGCAACGTGGCACTCTTCGTGAATATTTATATGGTTCAGATAACGAACATCTTACTTGGAAGCAGAGACTAGAGATTCTATTGGGTGCAGCGAGGGGGTTGNCAAGGTCTGATAGTTGA 1935 0.3514 MTNSIIIKIYMKITLLSLILLLYPLVANSYNPDYNLAINCGSSTNTIALDNRLWVGDDAAFTEPKTTNPSFTTQPNSLASIGIPFITTARASLSNFTYSFSSITTSPVFLRLHFYPTSYPNFELSNAIFSVQVNNNLTLLKNFNSSLWANDNPITKEYCIQVKPHEKLNITFIPININQSHPSYAFINGIEVVSMPSYLYYTNFTDGLSYHLKSLDTDAQPDYQLQNNKALEMVYRVNVGQNQVAPNKDTGMFRFWDTDYPLYLKIQYSQSISSGFGEHLNYLKNTVPNYTAPEDVYLTGRSYGKDAKEDYNVTWSFEVDSIFTYMIRLHFCEFDPKITNIGDRVFQIFIDDILAENGADVFSWSDRQILVPVHKDYAVTIYSLEGSSQIERVNISIKLQRMPNSSMQTTAYQDVILNGIEIFKISDNNNNLAGVNPKHLSPNEPLSPSPQSKSKNSTMLIFIAVGVSCLLLAFVTTGIIVFVRRRRRFESHFEMDEISWKTKKEGSSTLPSHLCRYFTIAEIKAATNNFDDIFIIGVGGFGNVYKGYIDEVTPVAIKRLKPGSQQGVNEFMNEIELLSQLRHIHLVSLIGYCNEGAEMILVYDFMQRGTLREYLYGSDNEHLTWKQRLEILLGAARGLXRSDS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00269 644 SUPERFAMILY Protein kinase-like (PK-like) 505 640 IPR011009 -
Tsu04g00269 644 Gene3D - 32 196 - -
Tsu04g00269 644 Gene3D - 229 427 - -
Tsu04g00269 644 PANTHER OS07G0166700 PROTEIN 28 639 IPR045272 GO:0004714|GO:0006468
Tsu04g00269 644 ProSiteProfiles Protein kinase domain profile. 530 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00269 644 Gene3D Transferase(Phosphotransferase) domain 1 512 640 - -
Tsu04g00269 644 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Tsu04g00269 644 Pfam Protein tyrosine and serine/threonine kinase 536 639 IPR001245 GO:0004672|GO:0006468
Tsu04g00269 644 SMART tyrkin_6 530 644 IPR020635 GO:0004713|GO:0006468
Tsu04g00269 644 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 639 - -
Tsu04g00269 644 Pfam Malectin-like domain 38 425 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00269 Tsu-Chr4 2412230 2414190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00269 25 639 Receptor kinase-like Gene Family AT3G51550 41.871 8.53e-133 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00269 Malectin_like 2.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00269 - - mtr:MTR_7g015420 850.892