Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g00266 | ATGTTGTTTCTTAGAAATTTCCAACCTCTCATAAATAAATACACTCTTCTCTTACTATCTTCTCACACAACCATGGCAAACTCTGTAAACAACAAAAATCACATGAAAATCACCCTACTATTTCTAATTTCTCTATTGTACCCTCTAGTTGCTAATTCATACAACCCTGATTACAAGTTAGCCATCAATTGTGGCTCCTCAACAAACACTACTGCCTCAGATAATCGAGTTTGGGTTGGTGATGATATTCATAACTCCAATCTCTTTACCTTCACACAACCAAAAACCACAAACCAATCTTTTAATACAAAGCCTAATTCCCTTTCAAATACTCAAATTCCATTCACAACAGCACGTATCTCTCTCTCAAATTTCACATACTCTTTTCCTATCAGTATCAATAATTCCCCTGTTTTTATTCGCCTTCATTTTTACTCAACTTCTTATCAAAACTTTGAACTTTCTAATGCAATTTTCTCTGTTGAAGTAAACAACAATCTTACCCTTCTTAAAAACTTCAAACCTTTAAATTGGGCTACGGACAGTTCAATCATGAAAGAATATATcatccaaatcaaaccaaatgaTAATTTGCTAAACATAACTTTCATTCCAAACAACATAAACCAGACAAATGTTTCTTATGCTTTTGTTAACGGAATTGAAGTTGTGTCTATGCCTTCTTATCTCTATTACACAAACTTCACTGATGGCCTAAGTTATCACTTAAAATCACTTGACACAGATGCCCAACCAGATTACcaacttcaaaacaacaaagcatTGGAGATGGTTTATAGAGTCAACGTTGGTCAAAAACAAGTTCCACCAGACCAAGATACAGGTATGTTTCGTAATTGGGAAATTGATTATCCTATTTACTTGAAGATACAATATTCACAAAGCATATCTAGTGGTTTTGGAGAACATCTTAACTATTTAAAAAACACCGTTCCTAATTACACTGCACCAGAAGATGTTTACTTAACTGGAAGAAGTTATGGAAAGGATGCGAAAGAGGATTATAATGTAACTTGGAGTTTTGAAGTTGATTCTACTTTTACTTATATGATAAGGTTACATTTTTGTGAGTTTGATCCGAAAATAACGAATATAGGTGATAGAGTCTTCCAGATTTTTATAGATGATATTTTGGCTGAAAATGGTGCTGATGTGTTTTCATGGAGTGATAGTCAAATATTGGTTCCTGTTCATAAGGATTATGCTGTGACTATATATTCTCTGGAAGGAAGCTCTCAAATTGAAAGAGTTAATATTTCAATCAAGCTTCAACGCTTGCCAAATAATTCGAAGCAAACAACAGCATATCAAGATGTCATATTGAATGGAATCGAGATTTTCAAGATAAGTGACAACAATAACAATCTTGCAGGAGTAAATCCCAAATATTTACCTATAAAGGAACCATTATTACCTAGTCCACAATCAAAGTCAAAGAACTCAACCATAGTCATTTTGATTGCGGTTGGAGTTTCATGTCTCTTGTTAGCATCTGTTGTTGGAATGATAGTTTTTGTTCGAAGGAGAAGAAAATTTGAATCTCGTCTTGAAATGGAAGAAAGTTCATGGCAGACAAAGACAGATGGTTCGTCAATTTTACCATCCCATTTGTGCCGCTATTTTACAATAGCGGAGATAAGAACCGCTACAAACAactttgatgatatttttatcattggGGTTGGAGGATTCGGCAACGTGTACAAAGGTTACATCGATGGAGTTATACCTGTTGCGATAAAACGTCTTAAACCTGGTTCTCAACAAGGTATTAACGAGTTCAGGAATGAGATAGAGTTGCTCTCTCAACTTCGTCATATTCACTTAGTTTCCCTCATTGGATATTGCAACGATGGTGTTGAGATGATTCTCGTTTACGACTTCATGCAACGTGGCACTCTTCGTGAATATTTATATGGTTCTGATAATGAACTTCTTACTTGGAAGCAGAGGCTCGAGATTCTATTGGGTGCAGCGAGGGGGTTACATTATCTTCATACAGGTGCGAAACAAAATATCATACATCGTGATGTTAAGAGTACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTCGGGTTATCAAAAGTGGGACCAACTGGAATGTCGATGACACACGTCAGCACTGTGGTGAAAGGTAGTATTGGGTATTTGGATCCAGAATACTACATGCGTCAAAGGTTGACTCTAAAGTCTGACGTGTACTCTTTTGGTGTTGTGCTTCTTGAGGTATTGTGCGGTAGACCTCCATTGGTTCGTTCTTCGGATAAGAAAAAAGCAAGTTTGGTCAGTTGGTTCCAAAAATGTTACAAGGAAGATTTGATAATGGAAGAGATGGTTGACCCATTCATAAAGGATTCCATAACAAGTGAGTGTTTGAAATGTTATTGTCAAATGGTGTTGAGTTGTTTGCATGATGATGGAAATCAACGAATGTCGATGAGTGATTTGGTTGGGGCATTAGAGTTTGCATTGCAATTGGTAATGAGTGAGGAAGATAGTAAGTATAGTGAGAcccaagaaaaggaaaaaagtgtGCAAAGGCTACCATACCAGTTTACGAGTGATGATGGGAGTGACAAATGTTTCACGAGTAGTAGTGATGACTATGGGTCTCATTCAAGTAAAGTAAGCACCATTTCAGCTAGTACTGAAGAACAACCATTGTTTACTGGTTCTGCGTTTTCTGAGATTGGAAACCCAAGAGCACGATAG | 2748 | 0.3544 | MLFLRNFQPLINKYTLLLLSSHTTMANSVNNKNHMKITLLFLISLLYPLVANSYNPDYKLAINCGSSTNTTASDNRVWVGDDIHNSNLFTFTQPKTTNQSFNTKPNSLSNTQIPFTTARISLSNFTYSFPISINNSPVFIRLHFYSTSYQNFELSNAIFSVEVNNNLTLLKNFKPLNWATDSSIMKEYIIQIKPNDNLLNITFIPNNINQTNVSYAFVNGIEVVSMPSYLYYTNFTDGLSYHLKSLDTDAQPDYQLQNNKALEMVYRVNVGQKQVPPDQDTGMFRNWEIDYPIYLKIQYSQSISSGFGEHLNYLKNTVPNYTAPEDVYLTGRSYGKDAKEDYNVTWSFEVDSTFTYMIRLHFCEFDPKITNIGDRVFQIFIDDILAENGADVFSWSDSQILVPVHKDYAVTIYSLEGSSQIERVNISIKLQRLPNNSKQTTAYQDVILNGIEIFKISDNNNNLAGVNPKYLPIKEPLLPSPQSKSKNSTIVILIAVGVSCLLLASVVGMIVFVRRRRKFESRLEMEESSWQTKTDGSSILPSHLCRYFTIAEIRTATNNFDDIFIIGVGGFGNVYKGYIDGVIPVAIKRLKPGSQQGINEFRNEIELLSQLRHIHLVSLIGYCNDGVEMILVYDFMQRGTLREYLYGSDNELLTWKQRLEILLGAARGLHYLHTGAKQNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSMTHVSTVVKGSIGYLDPEYYMRQRLTLKSDVYSFGVVLLEVLCGRPPLVRSSDKKKASLVSWFQKCYKEDLIMEEMVDPFIKDSITSECLKCYCQMVLSCLHDDGNQRMSMSDLVGALEFALQLVMSEEDSKYSETQEKEKSVQRLPYQFTSDDGSDKCFTSSSDDYGSHSSKVSTISASTEEQPLFTGSAFSEIGNPRAR | 915 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g00266 | 915 | Pfam | Protein tyrosine and serine/threonine kinase | 566 | 831 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu04g00266 | 915 | Gene3D | Phosphorylase Kinase; domain 1 | 521 | 635 | - | - | |
Tsu04g00266 | 915 | Gene3D | Transferase(Phosphotransferase) domain 1 | 636 | 859 | - | - | |
Tsu04g00266 | 915 | CDD | STKc_IRAK | 566 | 833 | - | - | |
Tsu04g00266 | 915 | PANTHER | CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN | 52 | 858 | - | - | |
Tsu04g00266 | 915 | ProSitePatterns | Protein kinases ATP-binding region signature. | 566 | 588 | IPR017441 | GO:0005524 | |
Tsu04g00266 | 915 | SUPERFAMILY | Protein kinase-like (PK-like) | 537 | 834 | IPR011009 | - | |
Tsu04g00266 | 915 | SMART | serkin_6 | 560 | 835 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g00266 | 915 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 680 | 692 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu04g00266 | 915 | Gene3D | - | 57 | 227 | - | - | |
Tsu04g00266 | 915 | Gene3D | - | 260 | 457 | - | - | |
Tsu04g00266 | 915 | PANTHER | OS07G0166700 PROTEIN | 52 | 858 | IPR045272 | GO:0004714|GO:0006468 | |
Tsu04g00266 | 915 | ProSiteProfiles | Protein kinase domain profile. | 560 | 835 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu04g00266 | 915 | Pfam | Malectin-like domain | 62 | 456 | IPR024788 | - | |
Tsu04g00266 | 915 | MobiDBLite | consensus disorder prediction | 857 | 896 | - | - | |
Tsu04g00266 | 915 | MobiDBLite | consensus disorder prediction | 847 | 896 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g00266 | Tsu-Chr4 | 2361203 | 2364123 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g00266 | 43 | 915 | Receptor kinase-like Gene Family | AT3G51550 | 43.326 | 0.0 | 647 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Tsu04g00266 | Malectin_like | 2e-33 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g00266 | - | - | mtr:MTR_7g015420 | 1165.6 |