Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00263 ATGGCAAACTCcataaacaacaaaattcaCACTAAAATGACCATACTATCTCTCATTTTGCTATTATACCCTCTAGTTGCTAACTCATACAAACCTGATTACAATTTAGCCATCAATTGTGGCTACTCAACAAACACTACTGCTTTAGATAATCGTTTTTGGATTGGTGATAATATTGATAACTCCAATATCTTTACTTTCATTGAACCAAATACCACAAATGCGTCTCTTCATAAACAACCTAATTCCACTGCATATACCGAAATTCCATACACAACCGCACGTGTATCTCTCTCAAATTTCACATACTCATTTTCTTCCATAACTAGTTCCCCTGTTTTCATTCGACTTCATTTTTACCCAACATCTTATCAAAACTTTAAACCTTCTAATGCAGTTTTTTCTGTTAAAGTAAACAACTTTACGCTTCTTGAAAACTTCAACCCTTCACTTTGGCCTCGTGATGACGAGGATAAACTCACCAAAGAATATTGCATCCAAATCAAACCACATGAGAATTTGCTAAACATAACTTTCATTCCCAACAATATAATAAACACTTCAAATGTTTATTATGCTTTCATTAACGGAATCGAAGTTGTGTCTATGCCTTCTTTTCTCTATTACACAAACCTGAATGACTCAAATTATTATCTCAATTTAGTTAACTTCAATAGGGACAATCAGTACTACCAAGTTCTTGAAGACAAAGCTTTGGAGATGGTTTATAGAGTTAACGTTGGTGGCAATCAAGTTCAACCAAGTGATGATACAGGTATGTTTCGTAATTGGGACACCGATTATCCTCTTTACTTGGAGCAACAATATCCAGAAAGTGTATCAAGAGGTTTTGGACAAGATCTAAACTATTTACAAAATACCATTCCAAATTACACTGCACCAGAAGATGTATACTTAACTGCAAGAACTTATGGTAAGTATGTGACAGTGGATTACAATGTAACTTGGAATTTTGAAGTTGATTCTGCTTTTACATATATAGTAAGGTTACATTTTTGTGAGTTTGATGAGCTTATAAAGAATTCAGATGATAGAaggtttgatatttttatagaTGATATTTTGGCTAAAAAATATGCTGATGTGATTAATTGGGGTGTTGATAGTCGAGTGGTTCCTGTTCATAAGGATTATGCAGTGCCTATGTACTCTAAAGAAGGAAACTCTCAAATTGAAAGAGTTAATCTTTCAATCAAGCTTCAACGATTACCAGCTGAATACACAAAATACCGTGATGTCATATTGAATGGAATAGAGATTTTCAAAATaagtgacaaaaataaaaatctcgCAGGACTTGAACCAAAATCCATTAATTTATCTCACCCGAATCAAGTTTATTCAACCCAATcgtcaaaaaaaacaaagatcaCTCTATCAATTGTTGTTGCGATTACAGTTTCAGTCCTTGTGCTAGCCATCACTGTGGGTATCATTGTTTATTGGCTACGGAGAAGGTTTCACAATGCTACGGAACATAACCGGTCAAAGACAAAGAACGACAAAGGATCACCATCTTTGCTGCCCCATTTGTGCCGCTACTTTACAATAGCGGAGATCAAAGAGGCCACAAACAACTTCGATGATGTTTCCATTATCGGAGTTGGAGGGTTTGGCAACGTGTACAAAGGTTTCATAGATGGATCTACACCTGTTGCGATAAAACGCCTTAAATCAGGCTCTCAGCAAGGTGCCAACGAGTTCATGAACGAGATTGAGTTACTCTCCCAGCTTCGCCACATTCACTTGGTATCCCTCGTCGGATATTGCAACGATGATACAGAGATGATTCTCGTTTATGAGTTCATGCAGCATGGTACTCTCTGTGAGTATCTCTATGGTTCCAATAACCAGCCGCTCCCATGGACGCAAAGGCTTGAGATTCTATTGGGTGCAGCGAGAGGGCTGCATTATCTTCATGCTGAGGTGAAACACAAGATAATACACCGTGACGTGAAGAGCACTAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTGTCTGACTTCGGCTTATCCAAAGTGGGACCCACAGAGATGATGACTCATGTCAGCACAATGGTGAAGGGGAGCCTTGGGTATTTAGATCCTGAGTATTATATGTTTCAAAGGCTTACTACAAAATCTGATGTGTACTCCTTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGGCCACCTTTGGTACGCGATTTGGATAAGAAAACAGCTAGTCTAGTTTCTTGGTTTCAAAGCTGTTACAATGAACGTGTGGCGATTAAGCAAATAGTGGATCCATCCATAAAGGATTCTCTCACGGATGAGTGTATCAAATATTATTGCAAGTTGGCGTTGAGTTGTCTGCATGATGACGGGGTTGAACGACCCACAATGAGTCAAGTGGTTGGGGGTTTAGAGTTTGCTTTAGAGATGGTGGTCAGTGAGAAAGATAGCCAATTTGGTAGCAATCAAATAGAGGGAACAAATAAGAAAGGCTCACATTTCTTGCAGAGTAATGAAGAGAGTGACCTACGTCTCGAAATATCCCATACCTACAAGGAGAGCATAGTCTCGACGGGATCAAGTACTCAGGAACATGCTTTCTCTGATAACAGTAATCTAGGAGCATGTTGA 2634 0.377 MANSINNKIHTKMTILSLILLLYPLVANSYKPDYNLAINCGYSTNTTALDNRFWIGDNIDNSNIFTFIEPNTTNASLHKQPNSTAYTEIPYTTARVSLSNFTYSFSSITSSPVFIRLHFYPTSYQNFKPSNAVFSVKVNNFTLLENFNPSLWPRDDEDKLTKEYCIQIKPHENLLNITFIPNNIINTSNVYYAFINGIEVVSMPSFLYYTNLNDSNYYLNLVNFNRDNQYYQVLEDKALEMVYRVNVGGNQVQPSDDTGMFRNWDTDYPLYLEQQYPESVSRGFGQDLNYLQNTIPNYTAPEDVYLTARTYGKYVTVDYNVTWNFEVDSAFTYIVRLHFCEFDELIKNSDDRRFDIFIDDILAKKYADVINWGVDSRVVPVHKDYAVPMYSKEGNSQIERVNLSIKLQRLPAEYTKYRDVILNGIEIFKISDKNKNLAGLEPKSINLSHPNQVYSTQSSKKTKITLSIVVAITVSVLVLAITVGIIVYWLRRRFHNATEHNRSKTKNDKGSPSLLPHLCRYFTIAEIKEATNNFDDVSIIGVGGFGNVYKGFIDGSTPVAIKRLKSGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDDTEMILVYEFMQHGTLCEYLYGSNNQPLPWTQRLEILLGAARGLHYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTEMMTHVSTMVKGSLGYLDPEYYMFQRLTTKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVSWFQSCYNERVAIKQIVDPSIKDSLTDECIKYYCKLALSCLHDDGVERPTMSQVVGGLEFALEMVVSEKDSQFGSNQIEGTNKKGSHFLQSNEESDLRLEISHTYKESIVSTGSSTQEHAFSDNSNLGAC 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00263 877 CDD STKc_IRAK 540 802 - -
Tsu04g00263 877 Pfam Malectin-like domain 38 430 IPR024788 -
Tsu04g00263 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tsu04g00263 877 SUPERFAMILY Protein kinase-like (PK-like) 508 806 IPR011009 -
Tsu04g00263 877 Pfam Protein tyrosine and serine/threonine kinase 539 803 IPR001245 GO:0004672|GO:0006468
Tsu04g00263 877 PANTHER OS07G0166700 PROTEIN 28 865 IPR045272 GO:0004714|GO:0006468
Tsu04g00263 877 Gene3D Transferase(Phosphotransferase) domain 1 610 828 - -
Tsu04g00263 877 Gene3D Phosphorylase Kinase; domain 1 494 609 - -
Tsu04g00263 877 Gene3D - 237 433 - -
Tsu04g00263 877 Gene3D - 32 204 - -
Tsu04g00263 877 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 865 - -
Tsu04g00263 877 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Tsu04g00263 877 ProSiteProfiles Protein kinase domain profile. 534 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00263 877 SMART serkin_6 534 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00263 Tsu-Chr4 2337378 2340057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00263 25 821 Receptor kinase-like Gene Family AT3G51550 44.111 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00263 Malectin_like 3.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00263 - - mtr:MTR_7g015250 1135.17