Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00262 ATGACCATACTATCTCTGATTTTGTTATTGTACCCTCTAGTTACTAACTCATACACCCCTGATTACAATTTAGCCATAAATTGTGGCTCCTCAAGAAACGCTACTTCATCTGATAAGCGTATTTGGGTTGGTGATAACTTCAATCTCTCTACTTTAATTGAACTAAAACCCATATACAATCCCCTTAACATTACCCAAGCTCCATACACAACCGCACGTTTCTTTTTCTCAAATTTCACATACTCTTTTCCTATCAATAATATTACTAATTCCCCTGTTTTTATTCGCCTTCATTTTTACCCAACTTCTTATCCACACTTTGAACCTTCTGATGCTATTTTTTCTGTTAAAGTAAACAACAACCTTACCCTTCTTAAAAACTTCAAACCTTCACTTTGGCTTCGTCATAATGATAATGGAGAAACAATCATCAAAGAATATTGCATCCGAATCAAACCACATGAGAATTTGCTACACATAACTTTCATTCCCTACACCATAGACGACACAGATCGTTATTATGCTTTCATTAACGGGATTGAACTTGTGTCTATGCCTTCTTTTCTCTATTACACAGACCTTGATGACTTAAATTATCATTTGAAATCACTTGACTTTGACAACGCAGAATACCAAATTCATAACGACAAAGCTTTGGAGATGGTTTATAGAGTTAACGTTGGTCTAATACAAGTTCCACCAAACCAAGATACAGGCATGTTTCGTAATTGGGAAGTCGAGTCTCCTCGTTTCTTGGAGAAAGAATATCCAGAAAGTGTATCAAGTGATTCTGGAGAACATTTAAACTATTTACAAAATTCCATTCCAAACTACACTGCACCAGAAATCGTATACTTAACTGCAAGAAGTTATGGAAAGGATGCGAAAGAGGAATATAATGTAACTTGGAATTTTGAAGTTGATTCTTCATTTACTTATATGGTAAGGTTGCATTTTTGTGAGTTTGATATGAATATAACAAATCAAGGTGATAGAGCTTTTCAGATTTTTATAGATGATATTTTGGCCGAAGAAAAGGCTGATGTGATTAGTTGGGCTGGTGATCCTTTGATTCCTGTTCATCAGGATTATGTTGTGACTATGTACTCTCTGGAAGGTAGGTCTCAAATTGAAAAAGTTAATCTTTCAATCAAGCTACAACCATTACCAGCAAATAATAAATACACAAGATATCTTCATGATGTCCTATTGAATGGAATTGAGATTTTCAAAATAAGTGACACAAATAACAATCTCGCAGGACCAAACCCAAAATCCATTGCTCTATCTCTCCCGCATCAAGTAGATTCAACCCAAtcctcaaaaaaaattaagatcgCCAAAGCTATCTTAGTTGTGATTACATTTTTAGGCCTCGTGCTAGTAATTGTTGTAGGTATAATAGTTTCTTGGCTGAGGAGAAGGTTTCAAGGTGAAAGGGAAGATAACTCGTCTAAGACAAAAAATGAAGGGTCATCATGTTTGCCGCCCCATTTGTGTCGCCGCTTTACAATTGCAGAGATCAGAGCAGCAACGAACAACTTCGATGATGTTTTCATCATCGGTGTTGGAGGGTTTGGCAACGTATACAAAGGTTGCATCGATGGATCCACATCCGTTGCGATAAAACGCCTTAAATCTGGCTCTCAGCAAGGTGCCAACGAGTTCATGAACGAGATTGAGTTACTCTCCCAGCTTCGCCATATTCACTTGGTGTCCCTGGTCGGATATTGCAACGATGACACAGAGATGATTCTCGTTTATGAGTTCATGCAACATGGTACTCTATGTGAGTATCTCTATGGTTCCAATAACCAGCCCCTACTATGGAAACAAAGGCTTGAGATTCTATTGGGTGCAGCGAGAGGGCTACATTATCTTCATGCAGAAGTGAAACACAAAATAATACATCGTGATGTGAAGAGCACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCAGACTTTGGGTTATCCAAAGTGGGACCCACGGGGATATCGACAACCCACGTCAGCACGATGGTGAAGGGGAGCCTTGGGTATTTAGATCCCGAGTACTATATGTTCCAAAGGCTTACTTTGAAATCTGATGTGTACTCCTTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGGCCACCTTTGATTCGCGATTTGGATAAGAACACAGCTAGTCTAGTTTGTTGGTTTCAAAGATGTTACGATGAAGGTGTGGCGATTGAACAAATAGTGGATCCATTCCTAAGAGGTTCTATCACCCATGAGTGTTTGAAATGTTATTGCAAGTTGGCATTGAGTTGTTTGCATGATGATGGGACTCAACGGCCCACAATGAGTCAAGTGGTTGGGGATTTAGAGTTTGCATTGCAATTGGTGCTGAGCGAAGAAGATAGTCAGTTTGGTAAGGCACAAAAAGAGGAAAGATATATGAAAGAACCAAAATTTTCACAGTTTATGGGTGACGAAAAGAGCGATCTAGATCTGCATTTCGTTAGATCCCACACCTACAAGGAGAGCACAATCTCAACATGGCGAAGTAGTCGAGAACACCCTTTCCCGGAGATTCGGAATTCAAGACCACGGTCATATTCATGTCAAAATCTCCAAGTTTATATTTAG 2625 0.3882 MTILSLILLLYPLVTNSYTPDYNLAINCGSSRNATSSDKRIWVGDNFNLSTLIELKPIYNPLNITQAPYTTARFFFSNFTYSFPINNITNSPVFIRLHFYPTSYPHFEPSDAIFSVKVNNNLTLLKNFKPSLWLRHNDNGETIIKEYCIRIKPHENLLHITFIPYTIDDTDRYYAFINGIELVSMPSFLYYTDLDDLNYHLKSLDFDNAEYQIHNDKALEMVYRVNVGLIQVPPNQDTGMFRNWEVESPRFLEKEYPESVSSDSGEHLNYLQNSIPNYTAPEIVYLTARSYGKDAKEEYNVTWNFEVDSSFTYMVRLHFCEFDMNITNQGDRAFQIFIDDILAEEKADVISWAGDPLIPVHQDYVVTMYSLEGRSQIEKVNLSIKLQPLPANNKYTRYLHDVLLNGIEIFKISDTNNNLAGPNPKSIALSLPHQVDSTQSSKKIKIAKAILVVITFLGLVLVIVVGIIVSWLRRRFQGEREDNSSKTKNEGSSCLPPHLCRRFTIAEIRAATNNFDDVFIIGVGGFGNVYKGCIDGSTSVAIKRLKSGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDDTEMILVYEFMQHGTLCEYLYGSNNQPLLWKQRLEILLGAARGLHYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMFQRLTLKSDVYSFGVVLLEVLCARPPLIRDLDKNTASLVCWFQRCYDEGVAIEQIVDPFLRGSITHECLKCYCKLALSCLHDDGTQRPTMSQVVGDLEFALQLVLSEEDSQFGKAQKEERYMKEPKFSQFMGDEKSDLDLHFVRSHTYKESTISTWRSSREHPFPEIRNSRPRSYSCQNLQVYI 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00262 874 SUPERFAMILY Protein kinase-like (PK-like) 489 790 IPR011009 -
Tsu04g00262 874 CDD STKc_IRAK 521 788 - -
Tsu04g00262 874 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Tsu04g00262 874 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Tsu04g00262 874 PANTHER OS07G0166700 PROTEIN 16 852 IPR045272 GO:0004714|GO:0006468
Tsu04g00262 874 Gene3D Transferase(Phosphotransferase) domain 1 591 811 - -
Tsu04g00262 874 SMART serkin_6 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g00262 874 Pfam Protein tyrosine and serine/threonine kinase 521 787 IPR001245 GO:0004672|GO:0006468
Tsu04g00262 874 Pfam Malectin-like domain 26 412 IPR024788 -
Tsu04g00262 874 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 16 852 - -
Tsu04g00262 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Tsu04g00262 874 Gene3D - 20 185 - -
Tsu04g00262 874 Gene3D - 217 413 - -
Tsu04g00262 874 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00262 Tsu-Chr4 2316540 2319364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00262 18 849 Receptor kinase-like Gene Family AT3G51550 43.349 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g00262 Malectin_like 1.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00262 - - mtr:MTR_7g015250 1111.67