Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00255 ATGTCTGGAAAGGGTTTGAAATCTATGAAAGATGAAAAGCAAGATTTGCAGAAGCAGATTGGGTGCATTACTGGATTTTTTCAGCTCTTTGATCGTCATCGATTCATCACAGGCCAACAATCTAGCAGATACATTCACAATGCATCTTCTTCAGGTGTAACCAATAATGGTATCAAAAAGCTTAATAGTACAATGCAGAAATCAAAGGCAAAGAATCAAAAAAATGCAAAAGAGAAGCAACAATTTTCGACAGAGTCGTCCATAACTTCTGTCTCTTCATCTTGTTCATCTAGCATGTCATCCATTGAATTGAAtgcaataattaaaacaaaatcatcatcaaccaaaCAAATCCAAATTCCGAAAAAACCACATTCACGCCAACAATCACATGATTTCTGTGATATTGTCAAAGATTCAATGCATAGAGAAGCTAATGGATTATATGTGAATACATTAACCAAGGAAGAAAAAAAGGGTCAAGCTTATGCATTGCATCAACATATAGATTCTCCAAGGCCTATGCTATCTCAAAACTTTGTCAATGCAAGAGTTACGGCTTCCGATGAACCATTGCATACTCTTTCAAGGTCGAAAAAATCACATTGGGACTCACCTCGACTCTCTTACGATGCATTGAAATCCACCACAAAGAATAAGGAACTTCCTAGGTTTTCCTTGGACAGCAAGCAAGGGTCCATTAGAGGGATCGAAGGAGGAAACAAGGCTCGCAATCTGTTGAATGGTTCACAGAAAGGGTATGAGAGGAACTCGAGCGCAATGCTTAATAAATTGCAAGAACCAGAAACATCAAAAAGATCAACGAGTGTTGTAGCTAAGTTGATGGGACTAGAAGTTCTCCCGAACTCAACACAAACTTGTCAGACTTCTATCTGCTCCAACGATAAAAAGGAGCTCATGGAAAGAACTAGCACAAGTGGTGAATCCAAGAAACACCAAAGTTCGGCGTCCCCAAGGAATAGAAGAGGTGATGATTCAATCACAAATGTGAAACCTTGTTCGCAATTTGCACTAGAACTGACTACTCCTTGGAGGCAACCTGATGCAGGCCAAAGTTCTTTGTTACAAGATTCTTCAAAGGGGAGTGATTCTGATATAAAAGCATCAAAGCCTTCCCTTTCTGTATATGGAGAAATTCAGCAAAGGCTGACGGAACTCGAGTTCAAAAAGTCCGGAAAGGATCTCAGAGCACTTAAACATATCCTTGAAGCAATGCAGAGATTTACCGATTCATCATCTGACACTAGGAATAATAATACTAGTGTCTGTGAAAATTCAAAAGTTCAAAGTCCAAGACTGCAACAAAAGGACGCGCGCTCGGAAACTACCACAGTTGAGCTGTCGAACTCAATCAAGGGTAGTAAATTACCAATTGTCATTGTGAAACCAACAAAAGTAACTAGAAAAACCAATAATCCTGCTTCTACAGAATTGTCAATTAATGATAAATCTTGTATCAGCAAATGTTCTTCAACAAATGGAAGATTGGTTGATAAACAAAAAGTTAAAGGTATtgtttcaacaacaaaaaataccaAGGACTCTTTTGGTCAAATTGTTCCTTCAAAATTGATGCAATCATCAAAATCTTTTCAAGAAAGCAGTCGAAAAAACACCAACTCTGGCAGCATAACAGGAACTGAGAGTCCAAGACTACAGAAGAAGGTTGGACTTGAGAGGCGTTCTCCGCCAAGTAGTCCAACGTCAGATTCCACCATTAACAGAAGACAGCATAATAGACAACAAAAATTCTCTATTTTGCAGGACAGAGACGAACATTTTACTGAGATGAGGAAATTCAAGCATCATgttaatgtcatttttgaaaattttgacaGTAACAGAAGCTTGGACACTCGAAGTGACGTAGAAGTCATTCGAATCGATCAATCTACAAATATCAATCAAAATAATGCATTTGAAGAGGTGAGTCAGGAAAGCTCTGAGGCCGATAAAATTGTCACTGCTGAACAGCCAAGTCCTGTATCTGTTCTAGATGCTGCATTCTATAAGGAAGATCCGCCATCTCCGGTGAAAAAGCAATCGAGCGTTTCAAAATATTTAGGTCAAGCTCTAAGCACTGATGCTAGTGACGAGAACACAGTGGCACAAATTCTGCAAGAAATTGACTGGATTGATGAGGAACTCATCGATTTTGATAACATCAAGAATCCTGATCATAAGTATATATCACAAATACTGACAGCATCAGGTCTAGTCAGCGACCGAAACTCTAACCAATTACTTCATTCACCGGGTCACATGACTAACCCGAAATTGTTCTTTGCACTCGAACAAATGAAGACAACTAAGACGCATTTCAATATCAAAGATGACGCCAAGAAAATTTCAAGGGATAGTCTTGAAAAAATGCAAAGAAAACTCAtatttgatgttgttgatgacatTTTAGTGAACAAACTGATATATGATAATTATTCTAGAAAGCTAAAAGGGAAGCGGCTTTTTGAGGAGTTATGTACAGAAATAGATGAGTTACAACCTCAAAATAGGAATGTCAGCAATGTTCATGAGGATGAGAATTTAATAAGTCTTTTGTGCAGAGATTTGAAGGATCACAACCCAATTTGGACTAACAGTTGCAGCGAAAAACCAAATATTGTGTTGGATATCGAACGGTCAAtctttaaagatttgataactGAAGTTTGTGAAAGATGA 2703 0.3681 MSGKGLKSMKDEKQDLQKQIGCITGFFQLFDRHRFITGQQSSRYIHNASSSGVTNNGIKKLNSTMQKSKAKNQKNAKEKQQFSTESSITSVSSSCSSSMSSIELNAIIKTKSSSTKQIQIPKKPHSRQQSHDFCDIVKDSMHREANGLYVNTLTKEEKKGQAYALHQHIDSPRPMLSQNFVNARVTASDEPLHTLSRSKKSHWDSPRLSYDALKSTTKNKELPRFSLDSKQGSIRGIEGGNKARNLLNGSQKGYERNSSAMLNKLQEPETSKRSTSVVAKLMGLEVLPNSTQTCQTSICSNDKKELMERTSTSGESKKHQSSASPRNRRGDDSITNVKPCSQFALELTTPWRQPDAGQSSLLQDSSKGSDSDIKASKPSLSVYGEIQQRLTELEFKKSGKDLRALKHILEAMQRFTDSSSDTRNNNTSVCENSKVQSPRLQQKDARSETTTVELSNSIKGSKLPIVIVKPTKVTRKTNNPASTELSINDKSCISKCSSTNGRLVDKQKVKGIVSTTKNTKDSFGQIVPSKLMQSSKSFQESSRKNTNSGSITGTESPRLQKKVGLERRSPPSSPTSDSTINRRQHNRQQKFSILQDRDEHFTEMRKFKHHVNVIFENFDSNRSLDTRSDVEVIRIDQSTNINQNNAFEEVSQESSEADKIVTAEQPSPVSVLDAAFYKEDPPSPVKKQSSVSKYLGQALSTDASDENTVAQILQEIDWIDEELIDFDNIKNPDHKYISQILTASGLVSDRNSNQLLHSPGHMTNPKLFFALEQMKTTKTHFNIKDDAKKISRDSLEKMQRKLIFDVVDDILVNKLIYDNYSRKLKGKRLFEELCTEIDELQPQNRNVSNVHEDENLISLLCRDLKDHNPIWTNSCSEKPNIVLDIERSIFKDLITEVCER 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00255 900 PANTHER LONGIFOLIA PROTEIN 709 898 IPR033334 GO:0051513
Tsu04g00255 900 MobiDBLite consensus disorder prediction 305 336 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 305 326 - -
Tsu04g00255 900 PANTHER LONGIFOLIA PROTEIN 1 707 IPR033334 GO:0051513
Tsu04g00255 900 MobiDBLite consensus disorder prediction 569 588 - -
Tsu04g00255 900 PANTHER LONGIFOLIA PROTEIN 709 898 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 231 250 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 524 557 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 416 449 - -
Tsu04g00255 900 PANTHER LONGIFOLIA PROTEIN 1 707 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 348 376 - -
Tsu04g00255 900 Pfam Domain of unknown function (DUF4378) 733 896 IPR025486 -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 79 94 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 524 590 - -
Tsu04g00255 900 MobiDBLite consensus disorder prediction 64 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00255 Tsu-Chr4 2257682 2263406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00255 1 898 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.878 1.42e-67 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00255 - - cam:101511032 986.482