Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00252 ATGACCAAAATCATAGAAATTTACAATGCAACACCATCTTCACAAGAACAATTACCTTCACAAACAACACTCCCTCTCACATTTTTTGACATATTTTGGCTAAGATTACCCCCAGTTCAAAGAATTTTCTTCTATGAATTCCCACACCAAACCTCATTTTTCTTCAATGCCCTTCTTCCAAAACTCAAAAAATCACTTTCTCTTACACTTAATCACTTCTATCCTCTTTTGGGTCATCTCATTTGGCCACATGATTCTCACAAACCTATTATCATATACCTTAAAGGCAACTCTCTTTTGCTTACAGTAGCTGAATCTGATGCTGATTTTAATCATTTATCTGGTAATAATCTTTGTGAAGCTTCacaaattcatgattttttacCTAACTTGAATATTTCTCATGATCAAGCTTCTGTTTTGGCTCTTCAAGTTACCCTTTTTCCAAACTATGGTTTTTCTATTGGTATTACTTCACATCATGCTGTTTTAGATGGTAAAACTTCAACTTCTTTTATCAAATCTTGGGCTTATCTATGTAATAAGCTTGAAATGGGAGAATCTGAACCACCCATTTTGCCACATGAATTTGTTCCTTTCTTTGATAGAAAAGTAATAAATGATTCAAATGGGTTAGACAAAAGATACGTGAGTGATTGGTTAAAGCAAGGTGGAACAAACAATAGAAGCTTAATGGTCTGGGATCTTGAAGTTCTTGAAGGGTCAACTAGAGGATTGTTTCAGTTAACTCGGTTGGATATTGAAAAGCTTAAGGAATTTGTAGTGTCAAAACAAAAGGATAGGAATGAAAATAAGAAACTTcatttgtcaacttttgtggtATCTATTGCGTATGCATGGGTATGTAGAGTGAAAGCAGAGGAAATTGAGAACAAAAATGTTATGCTGGCTGTGAATATCGATTGCAGGAATCGGTTGGATCAACCGGTTCCTGCAACATATTTTGGAAATTGTATTGGAGCAAGAGTGGCAATAGTTGAAACAAGTAAGTTATTGGGAGAATATGGAATAATTGTGGCTATTGAAGTGATTAGTGAAACTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAAATTGGACTTCGTTGTTACTTGAAGGTGTCGCCATTTCTGATGTTACAACAATTGCTGCTGCTGGTTCACCTAAATTTGAGGTTTATAGTACTGATTTTGGTTGTGGAAAACCAAAGAAAGTTGAAATGGCTTCTATAGATAGAACTGGAGCTTTTTGTATTTCTGATACTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAAAAAAGCAATGGAGGCCTTTGCTTCTCTCTTTTCAAATGGCATTGCATCTTGA 1365 0.3436 MTKIIEIYNATPSSQEQLPSQTTLPLTFFDIFWLRLPPVQRIFFYEFPHQTSFFFNALLPKLKKSLSLTLNHFYPLLGHLIWPHDSHKPIIIYLKGNSLLLTVAESDADFNHLSGNNLCEASQIHDFLPNLNISHDQASVLALQVTLFPNYGFSIGITSHHAVLDGKTSTSFIKSWAYLCNKLEMGESEPPILPHEFVPFFDRKVINDSNGLDKRYVSDWLKQGGTNNRSLMVWDLEVLEGSTRGLFQLTRLDIEKLKEFVVSKQKDRNENKKLHLSTFVVSIAYAWVCRVKAEEIENKNVMLAVNIDCRNRLDQPVPATYFGNCIGARVAIVETSKLLGEYGIIVAIEVISETLETLKDGVLNGAENWTSLLLEGVAISDVTTIAAAGSPKFEVYSTDFGCGKPKKVEMASIDRTGAFCISDTRNGDGVEIGFVSKKKAMEAFASLFSNGIAS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00252 454 Gene3D - 1 228 IPR023213 -
Tsu04g00252 454 Pfam Transferase family 16 447 - -
Tsu04g00252 454 Gene3D - 241 453 IPR023213 -
Tsu04g00252 454 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 5 453 - -
Tsu04g00252 454 PANTHER - 5 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00252 Tsu-Chr4 2225243 2227228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00252 42 444 Monolignol Biosynthesis Gene Families AT5G48930 22.986 5.93e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00252 - - mtr:MTR_7g014230 739.184