Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00248 ATGACAAGAATCATAGAAATTGTCAATGTATCACCATCTTCACAAGAACAATTACCTTCACAAACATCACTCCCTCTCACATTTTTTGACATACTTTGGTTAAGATTACCACCAGTTCAAAGAATTTTCTTCTATCAATTTCCACACCAACCCTCACTTTTCTTCAATACCCTTCTTCCAAAACTCAAAAAATCACTTTCTCTTACACTTGATCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCACATGATTCTCACAAACCTATTATCAAATACCTTAAAGTCAACTCTCTTTTGCTTGCAGTAGCTGAATCTGATGCTGATTTCAATCATTTATCTGGTAATAATCTCTGTGAAGCTTCACAAATTCATGATCTTTTACCTAACTTGAATATTTCTCATGATCAAGCTTCTCTTTTGGCTCTTCAAGTTACTCTTTTTCCAAACTATGGCTTTTCTATTGGTATTACTTCACATCATGCTGTTTTAGATGGTAAAACTTCAACTTCTTTTATCAAATCTTGGGCTTATTTGTGTAATAAGCTTGAAAGTGGAGAATCTGAATCAAAATCTGAATTAGAGTCACCCCTTTTATTGCCAGCTGAATTTGTTCCTTTCTTTGATAGAAATGTAATCAATGATCCAAATGGattagaagaaaaatatatgaGTGTTTGGTTAAATCAAGGTGGAACAAAGAATAGAAGTTTAATGGTTTGGGATCTTGAAGTTCCTGAAGAGTCAACTAGAGGATTATTTCGGTTAACTCGGTTGGATATCGAAAAGCTTAAGGAATTTGTAGTGTCAAAACAAAAGGGGAGGAATGAAAATAAGAAACTTCATTTGTCAAATTTTGTGGTATCTATTGCATATGCATGGGTATGTAGAGTGAAAGCTGAGGAAATTGAGAACCAAAATGTTATGCTGGCTGTGAATATCGATTGCAGGAATCGGTTAGATCAACCGATTCCTGCAACATATTTTGGAAATTGTATTGGAGGTAGAATTGCAATTGTTGAAACATGTAAGTTATTGGGAGAAGATGGACTAATTGTGGCTGTTGAAGTGATGAGTGAAGCTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAAATTGGTGCTCAGGGTTAGTTGAAGGTGTTGCCACTGCTGATGTTAAAACAATTGGTGCTGCTGGTTCACCTAAATTTGAGGTTTATAGTActgattttggttttggaaaGCCAAAGAAAGTTGAAATGGCTTCTATAGATAAAACTGGAGCTTTTTGTATTTCTGATACTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAAAAAAGCAATGGAGGCCTTTGCTTCTCTATTTTCAAAAGGCATTGCATCTTGA 1386 0.3442 MTRIIEIVNVSPSSQEQLPSQTSLPLTFFDILWLRLPPVQRIFFYQFPHQPSLFFNTLLPKLKKSLSLTLDHFYPLLGHLIWPHDSHKPIIKYLKVNSLLLAVAESDADFNHLSGNNLCEASQIHDLLPNLNISHDQASLLALQVTLFPNYGFSIGITSHHAVLDGKTSTSFIKSWAYLCNKLESGESESKSELESPLLLPAEFVPFFDRNVINDPNGLEEKYMSVWLNQGGTKNRSLMVWDLEVPEESTRGLFRLTRLDIEKLKEFVVSKQKGRNENKKLHLSNFVVSIAYAWVCRVKAEEIENQNVMLAVNIDCRNRLDQPIPATYFGNCIGGRIAIVETCKLLGEDGLIVAVEVMSEALETLKDGVLNGAENWCSGLVEGVATADVKTIGAAGSPKFEVYSTDFGFGKPKKVEMASIDKTGAFCISDTRNGDGVEIGFVSKKKAMEAFASLFSKGIAS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00248 461 Gene3D - 1 235 IPR023213 -
Tsu04g00248 461 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 6 460 - -
Tsu04g00248 461 Pfam Transferase family 16 454 - -
Tsu04g00248 461 Gene3D - 245 460 IPR023213 -
Tsu04g00248 461 PANTHER - 6 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00248 Tsu-Chr4 2212229 2213614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00248 42 451 Monolignol Biosynthesis Gene Families AT5G48930 24.048 9.84e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00248 - - mtr:MTR_7g014230 720.694