Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00245 ATGTTCATGGCTTCCAACAACATTAAAATCCATGAATACTTCAAAGTTGTTCCTCTACAATGTCCATCAACCCAAACATCAACAACACCTCTCACTTTCTTTGACATATATTGGCTAAGGTTTCATCCAGTAGAAAGAATCTTCTTCTACACCCTCCCAAATTCACAATCacactcttcttttttctaCCAAAATATTGTTCCAAAACTCAAAACCTCACTTTCTTTAACCCTTCAACACTTTCTCCCTTTAGCCGGTAAAATCATTTGGCCTTCTGATTCTCCCAAGCCATTCATTCAATACAATTCCAATGATGATGACGGTGTTTCTTTGCTCATTACAGAGTCTGATTTAGATTTTAACCatgtcattgaaaactcacccAATAAAACTTCTTTGTCTCGTTCTTTTATACCTCACTTAGAATCAACAGATTCTTTTGCTTCTATTATCTCATTTCAAATAACCCTTTTTCCTAAAAATGGTTTTTCCATTGGAATAAGCACACACCATGCTATTTTTGATGGAAAATCTTCAACTATGTTAATCAAAGCTTGGGCTTATCTATGCCAGAAACTCATAGAAAATGAAGAATCGCCAATTTTGTTGCCAGAGTTAGAACCATTTTTTGACAGGACAATCATCAAAGATCAAAATGAACTTGGTGATACATTAACAAATAATTGGATCGAGATCATGGCCAAAATGTTCCCAAATGAAAAAGGTAATGAACGATGCTTGAAGATTTTACCTTTTAACCCAAATCTAGATGATTATGTTCGTGCTACGTTCGAGCTCACACGTGAAGATTTGAATAAGATAAAGCAAATAGTGTTATCCAAATGGGAAATATTTGATACAAATGAACCAAAGCCCCAAACACTATCatcttttattctcacttgTGCTTATTCGCTCGTTTGTGTTGCAAAAGCGATTCACAGagttgaaaaagagaaagaaaaatttgCTTTTGCGTTCAACGTAGATTGTAGAGCAAGGTTAGAGCCACCAATACCAAATAACTATTTTGGAAATTGTGTATGGGGACACTTTATCGATACAAATCCATCTGATTTCATAAAAGAAGATGGGGTGTTTTTAGTTGCTAAGAGCATTCATGAAAAAATAGTGATGATAAACGAAAAGGGTGCTCTTGAAGGAACTAATGATGCatttgataaatatatttctatGACAAGTGAAGGAATTGAAATTATTGGAGTGGCAGGGTCTAACAAATTTGGTGTTTATGAGATTGATTTTGGTTTGGGAAGGCCGGAAAAGGTGGAGATAGTATCAATTGATAGAGGTTTAACCATTGGCCTCGCTGAGAGCAAAAATGGCAAAGGTGAAATTGAAGTTGGGTTGGCTCTTAATAAGCATGTCATGGATCTCTTTAGCACTTTATTTCTTGAAGGTTTGCATTAA 1431 0.3333 MFMASNNIKIHEYFKVVPLQCPSTQTSTTPLTFFDIYWLRFHPVERIFFYTLPNSQSHSSFFYQNIVPKLKTSLSLTLQHFLPLAGKIIWPSDSPKPFIQYNSNDDDGVSLLITESDLDFNHVIENSPNKTSLSRSFIPHLESTDSFASIISFQITLFPKNGFSIGISTHHAIFDGKSSTMLIKAWAYLCQKLIENEESPILLPELEPFFDRTIIKDQNELGDTLTNNWIEIMAKMFPNEKGNERCLKILPFNPNLDDYVRATFELTREDLNKIKQIVLSKWEIFDTNEPKPQTLSSFILTCAYSLVCVAKAIHRVEKEKEKFAFAFNVDCRARLEPPIPNNYFGNCVWGHFIDTNPSDFIKEDGVFLVAKSIHEKIVMINEKGALEGTNDAFDKYISMTSEGIEIIGVAGSNKFGVYEIDFGLGRPEKVEIVSIDRGLTIGLAESKNGKGEIEVGLALNKHVMDLFSTLFLEGLH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00245 476 PANTHER - 3 476 - -
Tsu04g00245 476 Pfam Transferase family 23 468 - -
Tsu04g00245 476 Gene3D - 8 240 IPR023213 -
Tsu04g00245 476 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 476 - -
Tsu04g00245 476 SUPERFAMILY CoA-dependent acyltransferases 310 444 - -
Tsu04g00245 476 Gene3D - 256 476 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00245 Tsu-Chr4 2192212 2193763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00245 22 473 Monolignol Biosynthesis Gene Families AT5G48930 23.871 6.93e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00245 - - gmx:100814826 602.438