Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00243 ATGGCTTTTAACAACAATATCAAAATCCATGAACAATTCAAAGTTGTTCCTCCATCATCAACACAAACCACAACAATCCCTCTCACTTTCTTTGACATATTTTGGCTAAAATTCCATCCAGTAGAACGCATTTTCTTCTACACCCTCCCAAATTCACAATCACACCCTActttcttctttcaaaaacTTGTTCCAAGTCTCAAATCATCACTCTCTTTAACCCTCCAACACTTTCTCCCTTTAGCCGGTAAAATCGTTTGGCCTTCTGAATCTCCGCAACCAATAATTCGATACACCCCAAATGATGGTGTTTCTTTGCTCATTGCAGAGTCTGATGCAGATTTCAACCGTGTCAATGAAAAGTCTCCCCATGAAGCTTCTTTGTCTCGATCTTTAATACCTCACTTAGAATCAACGAATTCTTTCGCTTCCATTATCTCAATCCAAGTCACTCTTTTCCCAAATAGTGGTGTTAGCATTGGAATAAGCGCACATCATGGTATTCTTGATGGAAAATCTTCAACCATGTTCATCAAAGCTTGGGCTTATCTGTGCAACAAAACAATTGAAACCGAAGAAGATTCACCAACTTTATTGCCAGATTTACAACCTTCGTTCAACAGGGAATTCATCAAAGACCCAAATCAACTTGGTGTTACATTCACAAATAACTGGATCGAGATCATGTCTAAGAAGTTCCCAAAtgaaaaagtaaacaaaaaaagtttgaaGATTGTCGCTTCTGAGCCAAAACTCGAAAACTCAGTTCGTGCCACGTTCAAGCTCACAAGTGAAGATTTGAATAAGATAAATCAAATGGTGTTAGCCAAATGGGAAGTATTTGATGAAAATGAATCAAAGCCACACATTCTATCATCATTCGCTCTCGCTTGTGCTTATTCACTCGTTTGTTTTGCAAAAGCGATTCAAGGAGttgaaaaggagaaaaaaaagtttgcgTTTGTGTTCGCTGTAGATGGAAGACGAAGGTTAGAGCCACCAATACCAAATAACTATTTTGGAAATTGTGTATTAGGACATTTCATTGATACACAACCATTGGATTTCATAAAAGAAGATGGAGTTTTTGTAGTTGCTAAGAGTATTcatgataaaataaagataataaatgATAAAGGTGTTCTTGAAGGAGTTAATGAAAGGTTTTCTAAATACACTTCTTTGTCAAGTGAAGGCTTTCAAATTATAGGACAAACGGGGTCCAATAGATTTGGTGTTTATGGAATTGATTTTGGTTGGGGAAAGCCTACAAAGGTGGAGATAATATCAGTGGATAGAGGTTTAAACATTGGTTTGGCAGAGAGCAAAGATGAGAGTGGTGGAGTTGAAGTTGGGCTTGTTCTAAATAAACATGTGATGGATCTCTTTAGTATTTTGTTTCATGAAGGACTTTGCATTAATTGA 1425 0.3523 MAFNNNIKIHEQFKVVPPSSTQTTTIPLTFFDIFWLKFHPVERIFFYTLPNSQSHPTFFFQKLVPSLKSSLSLTLQHFLPLAGKIVWPSESPQPIIRYTPNDGVSLLIAESDADFNRVNEKSPHEASLSRSLIPHLESTNSFASIISIQVTLFPNSGVSIGISAHHGILDGKSSTMFIKAWAYLCNKTIETEEDSPTLLPDLQPSFNREFIKDPNQLGVTFTNNWIEIMSKKFPNEKVNKKSLKIVASEPKLENSVRATFKLTSEDLNKINQMVLAKWEVFDENESKPHILSSFALACAYSLVCFAKAIQGVEKEKKKFAFVFAVDGRRRLEPPIPNNYFGNCVLGHFIDTQPLDFIKEDGVFVVAKSIHDKIKIINDKGVLEGVNERFSKYTSLSSEGFQIIGQTGSNRFGVYGIDFGWGKPTKVEIISVDRGLNIGLAESKDESGGVEVGLVLNKHVMDLFSILFHEGLCIN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00243 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 474 - -
Tsu04g00243 474 PANTHER - 4 474 - -
Tsu04g00243 474 Gene3D - 7 237 IPR023213 -
Tsu04g00243 474 Pfam Transferase family 7 463 - -
Tsu04g00243 474 Gene3D - 251 472 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00243 Tsu-Chr4 2181408 2182928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00243 7 469 Monolignol Biosynthesis Gene Families AT5G48930 23.950 2.50e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00243 - - mtr:MTR_7g014620 595.504