Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00231 ATGGCTGTGGAGGAATCTGAGCAAGTGATTCCTGATTTAGAAAGAGAGGATAATTTAATTGCTGCAGCAAGGCATATTGTGATGGCTTTAGGGTCTAAGAAGAATCTTACTAGTGATGAAAAGAAGATTCTTTCTGATCTTGGATCACAGTTGTCTTCGATGAACATACAAAGTGAGAAGGATGAAGGGAAGATAGGGAAAAGGGAGGATGATCTTGATGTGGAGGACGAGGTGGATGAGGAGGACGAAGAGGGTGTTGGTGTTATTGAAGAACGGATTGGTTTGATTCAggagaaaataatgaaatgggAGGAAGATCAATCGATGATTTGGGATTTGGGACCTGATGAAGCGTCTGAGTATTTGAATGCGGCTAATGATGCTCGCATATTGATCGAGAAGTTGGAGAGTATGCATTTGAGTAAAGAGGATCAAGAGTATAAGTTTTTGCAAAGGGCTTATAGTGTTCTTCAGACGGCTATGACACGGCTTGAAGAAGAGTTTAGCAACTTGCTTATCCAGAATAGGCAACCTTTTGAACCGGAGTATGTCTCTTTTCGATCGACCGAGGAAGATGTTGTAGATGGGAGTTCTTTTGTCTCTTTAGGTGATGAATCATTTGAGGAATCACTTCGAAGGGATAGTGTTAGCCGAGCTGCTGAGGAGCATGTCATCGATTTAGTGCATCCGGCCGTGATTCCTGATCTCAGGTGTATTGCAAACTTGCTTTTCGCTTCAAATTATGCTCAAGAATGTGCACAAGCTTATACCATTGTTAGGAGGGATGCTTTAGACGAGTGTTTGTTCATTCTTGAAATGGAAAGGCTAAGTATTGAAGATGTTTTGAAAATGGAGTGGAGCACTTTGAATTCAAAGATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTTAGGGTTTATCTTGCAAGTGAAAGGTGGCTTAGTGACCAAATTTTCGGAGAAGGCGAGCCGGTTAGTCAAGTTTCTTTTGTCGACGCATCAAAAGCTTCAATTTTGCAGCTTCTGAATTTCGGTGAAGCTATGTCTATCGGTCCTCACCAACCCGAGAAGTTGTTTCGGATTCTCGACATGTATGAAGTTCTTGCAGACCTTATGCCTGACATCGATGCTTTGTATCCGGACGAGGTTGGTTCCTCGGTTAAATTTGAATGTCATGAGGTTCTGACAAGATTGGGAGATTGTGTGAGGATAACATTTCTTGAATTCAAAAACACTGTCGGTTCAAATCCGTCAACAACACCTCTAGTTGGTGGAGGGATACATCCTTTGGCGAGGTATGTTATGAATTATCTTAGAACTCTTACCGATTACGGTGAAGCGCTGAATCATCTTCTGAAAgaccaagaagaagaagatgccATTTCATCGTCACCTGACACAAGTCCAGGTACCGAAGAAGATAACAGAAGCGAGGGATCTCCCGGTAGATTTCCCTCGATGTCACGGCAATTCCTATCATTTGCTTCAGTCTTGGAAAACAATCTTGAGGAGAAATCGAAGTTATACAAAGAGACTTCATTGCAGCACTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAAGGGTCTGAACTTAGGGTCATATTCGGAGACGAATGGATTCGAAAACACAACTGGAAGTTTCAGCAGCACGCAATGAAATACGAGAGAGCTAGTTGGATTTCAATTCTCAACTTGCTTAAGGACGAAGGAATTCACGCTCCCGGTTCGAATTCTGTCTCGAAAACTCTTCTGAAGGAAAAGCTACGAAGCTTCTACCTCGGCTTTGAGGATATTTACAGGATTCAAACGGCTTGGTCGATTCCAGATGTTCAGCTTCGCGAAGATTTGCGGATTTCTATATCAGTTAAAGTGATTCAAGCTTATAGGACATTTGTTGGAAGGAATAATAGTCATATGAGTGACAAAAATATTAGATACACTGCTGATGATTTAGAAAATTATCTTTTGGATTTCTTTGAAGGTTCTCAAAAGTTGTTGCAAAATCCTCATAGGAGGTGA 2031 0.4037 MAVEESEQVIPDLEREDNLIAAARHIVMALGSKKNLTSDEKKILSDLGSQLSSMNIQSEKDEGKIGKREDDLDVEDEVDEEDEEGVGVIEERIGLIQEKIMKWEEDQSMIWDLGPDEASEYLNAANDARILIEKLESMHLSKEDQEYKFLQRAYSVLQTAMTRLEEEFSNLLIQNRQPFEPEYVSFRSTEEDVVDGSSFVSLGDESFEESLRRDSVSRAAEEHVIDLVHPAVIPDLRCIANLLFASNYAQECAQAYTIVRRDALDECLFILEMERLSIEDVLKMEWSTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSQVSFVDASKASILQLLNFGEAMSIGPHQPEKLFRILDMYEVLADLMPDIDALYPDEVGSSVKFECHEVLTRLGDCVRITFLEFKNTVGSNPSTTPLVGGGIHPLARYVMNYLRTLTDYGEALNHLLKDQEEEDAISSSPDTSPGTEEDNRSEGSPGRFPSMSRQFLSFASVLENNLEEKSKLYKETSLQHLFLMNNLHYMAEKVKGSELRVIFGDEWIRKHNWKFQQHAMKYERASWISILNLLKDEGIHAPGSNSVSKTLLKEKLRSFYLGFEDIYRIQTAWSIPDVQLREDLRISISVKVIQAYRTFVGRNNSHMSDKNIRYTADDLENYLLDFFEGSQKLLQNPHRR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00231 676 Gene3D Exocyst complex component Exo70 102 671 - -
Tsu04g00231 676 SUPERFAMILY Cullin repeat-like 106 664 IPR016159 -
Tsu04g00231 676 MobiDBLite consensus disorder prediction 455 485 - -
Tsu04g00231 676 Pfam Exo70 exocyst complex subunit 294 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu04g00231 676 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 670 - -
Tsu04g00231 676 Coils Coil 147 167 - -
Tsu04g00231 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 670 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00231 Tsu-Chr4 2074193 2077100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00231 12 676 EXO70 exocyst subunit family AT3G29400 48.378 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00231 K07195 - gmx:100799102 1086.25