Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu04g00222 | ATGGGCAACCCACATTTTCTTGCAATACCATTCCCAATTCTAGGTCATATGAATCCTCTTATGCAATTCTCTCAAGTTTTAGCCAAACATGGTTGCAAAATCACTTTCTTGACTTCAGATGAGAATTACAATAAAATGAAGACAACTTCAATTAATGATGGAGAGGAGAAGCTCATAGAACCATACATAAATTTAGTTTCTCTCCCAGATGGTATCAATCCTCAAGATGATAGAAAAGATTTAGCCAAAGTTATTTTGTCCACAAAAATCACTATGAGTCCAATGCTTCCAAAACTCATAGAAGATATTAATGCTCTTGATAGTGACAACAAGATTTCTTGTATAATTGTCACTAAAAATATGGGATGGGCTTTGGAAGTTGCTCACCAATTGGGAATTAAAGGAGCACTTTTCTGGCCAGCCTCAGCAACTTCATTGGTGTCCTTTAACTCCATGGAGAGGCTTGTTGAAGAGGGAATTATAGATTCTCAAAGtgGTCTTCCAAAGAAACAAGAAATTCAGCTTTCATCAAATTTGCCTATGATGGAAGCAGCTGCCATGCCATGGTATAGTTTAAGTAATGCCTtcttctttcttcatatgatgaAAGAGatgcaaaatttgaatttaggAGAGTGGTGGCTTTGTAACACTAGTATGGATCTTGAGGCTGAAGCAATTTTCTTATCACCAAAGTTCCTACCAATTGGACCATTAATAGGAAATGAGGATAACAACATAGGCTCTTTATGGCAAGAAGATGAAACATGCCTAGAATGGTTAGATCAACACCCCCATAAATCAGTCATATATGTTTCATTTGGTAGTTTGATATCAATTGGGccaaatcaattcaaagaaTTAGCTCTTGGGCTTGATCTTCTCAAAAGGCCTTTTCTTTGGGTTGTACGTAAAGATATGGCCCATATGAATAATGAGCTAGAAAATACATACCTAGATGAATTCAAAGGAAATCAAGGTAAAATTGCTTGTAGTTTCAAGTCTAGAACAAAAGCTATGGAGAAATGTGGTGACTTGTTTTCAATATGGAACTATGATGGTAAAATTGCATATAAAGACATAATTGAAACAACAGAGAATTTTCACATAAAATATTGCATAGATATTGGTGGTTATGGTGGTAGTGTTTATAAAGCAAATCTACCTAGTGGTAGAGTAGTGGCATTGAAGAAACTTCACAATTTAGAAGCTAATGAACCAATAATTAGAAGGATTTTCAAGAATGAGGTGAGGATGTTAACAAAGGTAAGACATAGAAATATTTTGAAACTTTATGGTTTTTGTTTGCACAATAGATGtatgtttttggttttggaaTACATGGAAAAAGGAAGTTTGTATTGTGTTTTACACAATGATGTTGAAGCAATGGAGTTGGATTGGAGCAAGAGGGTTGACATTGTCAAAGGAATTGCACATAGTTTAGCATACCTTCATTATGATTCCAATCCAGCAATTATTCATAGAAATGTGACAACCAAAAATGTTCTTTTGAACTCCGAAATGGAAGCTCGTTTGTCTAACTTTGGTATAGCAAGACTTCGAAATTCTATTTCAAGTTCATCGAGTCGAACAATAATTGCAGGCACTTATGGATATTTGGCACCAGAACTTGCTTATACCGATAGTGTAACCGAAAAATGTGACGTGTATAGCTTTGGAGTGGTTGCTCTTGAAATTATAATGGGAAAACATCCTGGAAACCTTGTTGCATCATTAAGATATTCATCCACTAGAAACATTCTCCTTAAAGATGTTTTAGATCATAGAATCATAGCAACCATCAATCAACAATATGCTAATAGCTTAGCTCTTATAGCAACACTAGCCTTTGCATGCCTTCATTCTCGACCAAGGTGTAGACCAACAATGAAATCAATCTCTACAATCCATAGCTTCACTCTCACTCTTCTTCTCCCACAGATCAACGTGTTTGATCAATTGATTGGAACTCAGGATCATCGATGGAATCTGAAGAagttttga | 2007 | 0.3433 | MGNPHFLAIPFPILGHMNPLMQFSQVLAKHGCKITFLTSDENYNKMKTTSINDGEEKLIEPYINLVSLPDGINPQDDRKDLAKVILSTKITMSPMLPKLIEDINALDSDNKISCIIVTKNMGWALEVAHQLGIKGALFWPASATSLVSFNSMERLVEEGIIDSQSGLPKKQEIQLSSNLPMMEAAAMPWYSLSNAFFFLHMMKEMQNLNLGEWWLCNTSMDLEAEAIFLSPKFLPIGPLIGNEDNNIGSLWQEDETCLEWLDQHPHKSVIYVSFGSLISIGPNQFKELALGLDLLKRPFLWVVRKDMAHMNNELENTYLDEFKGNQGKIACSFKSRTKAMEKCGDLFSIWNYDGKIAYKDIIETTENFHIKYCIDIGGYGGSVYKANLPSGRVVALKKLHNLEANEPIIRRIFKNEVRMLTKVRHRNILKLYGFCLHNRCMFLVLEYMEKGSLYCVLHNDVEAMELDWSKRVDIVKGIAHSLAYLHYDSNPAIIHRNVTTKNVLLNSEMEARLSNFGIARLRNSISSSSSRTIIAGTYGYLAPELAYTDSVTEKCDVYSFGVVALEIIMGKHPGNLVASLRYSSTRNILLKDVLDHRIIATINQQYANSLALIATLAFACLHSRPRCRPTMKSISTIHSFTLTLLLPQINVFDQLIGTQDHRWNLKKF | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu04g00222 | 668 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 642 | - | - | |
Tsu04g00222 | 668 | Gene3D | Phosphorylase Kinase; domain 1 | 332 | 447 | - | - | |
Tsu04g00222 | 668 | Gene3D | Glycogen Phosphorylase B; | 2 | 252 | - | - | |
Tsu04g00222 | 668 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 2 | 318 | - | - | |
Tsu04g00222 | 668 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 331 | 637 | - | - | |
Tsu04g00222 | 668 | Pfam | Protein tyrosine and serine/threonine kinase | 379 | 635 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu04g00222 | 668 | PANTHER | FLAGELLIN-SENSING-LIKE PROTEIN | 331 | 637 | - | - | |
Tsu04g00222 | 668 | Gene3D | Glycogen Phosphorylase B; | 253 | 331 | - | - | |
Tsu04g00222 | 668 | SUPERFAMILY | Protein kinase-like (PK-like) | 353 | 636 | IPR011009 | - | |
Tsu04g00222 | 668 | CDD | GT1_Gtf-like | 4 | 306 | IPR002213 | GO:0008194 | |
Tsu04g00222 | 668 | ProSiteProfiles | Protein kinase domain profile. | 368 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu04g00222 | Tsu-Chr4 | 2003503 | 2010653 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu04g00222 | 1 | 302 | Glycosyltransferase | AT3G02100 | 37.700 | 2.83e-63 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tsu04g00222 | PK_Tyr_Ser-Thr | 1.3e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu04g00222 | - | - | gmx:100799867 | 465.692 |