Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00222 ATGGGCAACCCACATTTTCTTGCAATACCATTCCCAATTCTAGGTCATATGAATCCTCTTATGCAATTCTCTCAAGTTTTAGCCAAACATGGTTGCAAAATCACTTTCTTGACTTCAGATGAGAATTACAATAAAATGAAGACAACTTCAATTAATGATGGAGAGGAGAAGCTCATAGAACCATACATAAATTTAGTTTCTCTCCCAGATGGTATCAATCCTCAAGATGATAGAAAAGATTTAGCCAAAGTTATTTTGTCCACAAAAATCACTATGAGTCCAATGCTTCCAAAACTCATAGAAGATATTAATGCTCTTGATAGTGACAACAAGATTTCTTGTATAATTGTCACTAAAAATATGGGATGGGCTTTGGAAGTTGCTCACCAATTGGGAATTAAAGGAGCACTTTTCTGGCCAGCCTCAGCAACTTCATTGGTGTCCTTTAACTCCATGGAGAGGCTTGTTGAAGAGGGAATTATAGATTCTCAAAGtgGTCTTCCAAAGAAACAAGAAATTCAGCTTTCATCAAATTTGCCTATGATGGAAGCAGCTGCCATGCCATGGTATAGTTTAAGTAATGCCTtcttctttcttcatatgatgaAAGAGatgcaaaatttgaatttaggAGAGTGGTGGCTTTGTAACACTAGTATGGATCTTGAGGCTGAAGCAATTTTCTTATCACCAAAGTTCCTACCAATTGGACCATTAATAGGAAATGAGGATAACAACATAGGCTCTTTATGGCAAGAAGATGAAACATGCCTAGAATGGTTAGATCAACACCCCCATAAATCAGTCATATATGTTTCATTTGGTAGTTTGATATCAATTGGGccaaatcaattcaaagaaTTAGCTCTTGGGCTTGATCTTCTCAAAAGGCCTTTTCTTTGGGTTGTACGTAAAGATATGGCCCATATGAATAATGAGCTAGAAAATACATACCTAGATGAATTCAAAGGAAATCAAGGTAAAATTGCTTGTAGTTTCAAGTCTAGAACAAAAGCTATGGAGAAATGTGGTGACTTGTTTTCAATATGGAACTATGATGGTAAAATTGCATATAAAGACATAATTGAAACAACAGAGAATTTTCACATAAAATATTGCATAGATATTGGTGGTTATGGTGGTAGTGTTTATAAAGCAAATCTACCTAGTGGTAGAGTAGTGGCATTGAAGAAACTTCACAATTTAGAAGCTAATGAACCAATAATTAGAAGGATTTTCAAGAATGAGGTGAGGATGTTAACAAAGGTAAGACATAGAAATATTTTGAAACTTTATGGTTTTTGTTTGCACAATAGATGtatgtttttggttttggaaTACATGGAAAAAGGAAGTTTGTATTGTGTTTTACACAATGATGTTGAAGCAATGGAGTTGGATTGGAGCAAGAGGGTTGACATTGTCAAAGGAATTGCACATAGTTTAGCATACCTTCATTATGATTCCAATCCAGCAATTATTCATAGAAATGTGACAACCAAAAATGTTCTTTTGAACTCCGAAATGGAAGCTCGTTTGTCTAACTTTGGTATAGCAAGACTTCGAAATTCTATTTCAAGTTCATCGAGTCGAACAATAATTGCAGGCACTTATGGATATTTGGCACCAGAACTTGCTTATACCGATAGTGTAACCGAAAAATGTGACGTGTATAGCTTTGGAGTGGTTGCTCTTGAAATTATAATGGGAAAACATCCTGGAAACCTTGTTGCATCATTAAGATATTCATCCACTAGAAACATTCTCCTTAAAGATGTTTTAGATCATAGAATCATAGCAACCATCAATCAACAATATGCTAATAGCTTAGCTCTTATAGCAACACTAGCCTTTGCATGCCTTCATTCTCGACCAAGGTGTAGACCAACAATGAAATCAATCTCTACAATCCATAGCTTCACTCTCACTCTTCTTCTCCCACAGATCAACGTGTTTGATCAATTGATTGGAACTCAGGATCATCGATGGAATCTGAAGAagttttga 2007 0.3433 MGNPHFLAIPFPILGHMNPLMQFSQVLAKHGCKITFLTSDENYNKMKTTSINDGEEKLIEPYINLVSLPDGINPQDDRKDLAKVILSTKITMSPMLPKLIEDINALDSDNKISCIIVTKNMGWALEVAHQLGIKGALFWPASATSLVSFNSMERLVEEGIIDSQSGLPKKQEIQLSSNLPMMEAAAMPWYSLSNAFFFLHMMKEMQNLNLGEWWLCNTSMDLEAEAIFLSPKFLPIGPLIGNEDNNIGSLWQEDETCLEWLDQHPHKSVIYVSFGSLISIGPNQFKELALGLDLLKRPFLWVVRKDMAHMNNELENTYLDEFKGNQGKIACSFKSRTKAMEKCGDLFSIWNYDGKIAYKDIIETTENFHIKYCIDIGGYGGSVYKANLPSGRVVALKKLHNLEANEPIIRRIFKNEVRMLTKVRHRNILKLYGFCLHNRCMFLVLEYMEKGSLYCVLHNDVEAMELDWSKRVDIVKGIAHSLAYLHYDSNPAIIHRNVTTKNVLLNSEMEARLSNFGIARLRNSISSSSSRTIIAGTYGYLAPELAYTDSVTEKCDVYSFGVVALEIIMGKHPGNLVASLRYSSTRNILLKDVLDHRIIATINQQYANSLALIATLAFACLHSRPRCRPTMKSISTIHSFTLTLLLPQINVFDQLIGTQDHRWNLKKF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00222 668 Gene3D Transferase(Phosphotransferase) domain 1 448 642 - -
Tsu04g00222 668 Gene3D Phosphorylase Kinase; domain 1 332 447 - -
Tsu04g00222 668 Gene3D Glycogen Phosphorylase B; 2 252 - -
Tsu04g00222 668 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 318 - -
Tsu04g00222 668 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 331 637 - -
Tsu04g00222 668 Pfam Protein tyrosine and serine/threonine kinase 379 635 IPR001245 GO:0004672|GO:0006468
Tsu04g00222 668 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 331 637 - -
Tsu04g00222 668 Gene3D Glycogen Phosphorylase B; 253 331 - -
Tsu04g00222 668 SUPERFAMILY Protein kinase-like (PK-like) 353 636 IPR011009 -
Tsu04g00222 668 CDD GT1_Gtf-like 4 306 IPR002213 GO:0008194
Tsu04g00222 668 ProSiteProfiles Protein kinase domain profile. 368 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00222 Tsu-Chr4 2003503 2010653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00222 1 302 Glycosyltransferase AT3G02100 37.700 2.83e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu04g00222 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00222 - - gmx:100799867 465.692