Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00213 aTGGTGTCATATCTTCACATACTTCTAGCCTTTTCCTTATTgttattattcattttcatgAAATACAAAACCATTATCAAGAACTCATCATTTCCAAAAGGTCCAAAAGGCCTACCTATCATTGGCTATCTTCATCAACTTGATACTTCAAATCTCCATTTTCAGTTTTGGAatctctcaaaaatttatggcCCTCTTTTctcctttcaaattggtttcAAGAAAGCAATTGTTATTTCAACACCTAAACTAGCTGAAGAGATTCTTAGAAATCATGATCATAGTGTATCTAGTAGACCTCCATCATATGGTACACAATTATTGTCTTACAATGGCATAGAAATGATATTTTCACCATACAATGATTGTTGGAGAGAGATAAGAAAAATTTGTGTTGTCCAATTCTTTAGCTCTAAAAAAATTTCTAGCTTTTCTCATGTGAGAAAATTTGAGGTCAAGCAAATGTTGAAAAAGATATCTAACCATGTTCATTCTTCCAAAATTTCAAACCTTAGTGAGATCATAATGTTGGTCTCAAGCTCTATAGTATGTAAAATTGCTTTTGGAAAAAGTTATGAACCTCAAGGGGGTGAGAAAAGTAGGTTCCATGATTTACTAAATGAGACACAAGCTATTTTCCTCTCCTTTTTTGTTTCTGATTATATTCCTTTCATGGGATGGATTGATAATCTTATGGGGTCAATTGCTCGTGTTGACAACACTTTCAAGGGTTTGGATGagttttttgaacaagttaTTATGGAACATCTTAATCCAAACAATAGgcagaaagaagaagatgagaagGATATAGTTGATGCTTTACTTGAGTTAAAGAAGCAAGGTCGTCTTTCAATTGATCTCACCAATAATCACATCAAAGCTGTTCTTATGAACCTACTTGTAGCAGCTACAGACACAAGTGCAGCCACATCAGTTTGGGTGATGACCGGACTAATGAAGAATTCAAGAATAATGAAGAAAGTTCAAGAAGAAGTTAGAAACCTCTATGGCAACAAAGACTTCATAGATGAAGATGATATTCAAAAGCTTGTATATCTCAAGGCTGTGATAAAAGAGACACTAAGATTCTATGCACCGGTACCACTGGCCCCAAGAGAGTGCATTAAAAGTTTCACACTAAATGGATACAAAATAGAACCAAAAACATTAGTGTATGTGAATATTTGGGCCATTCATAGGGACTCTGAGACATGGAAAGATCCAGAAGAGTTTTATCCAGAGAGATTCTTAAATAGTGATGTAGATTTTAAGGGACGAGATTTTGAGTTGATTCCATTTGGTGCAGGGCGTAGAATTTGCCCCGGCATACCAATGGGAATCGCTACAGTGGAAATGATAACTGCAAaccttttaaattcatttgattggGAAATGCCTGAAGGGATGACTAAGGAAGATATAGACATTGAAGGGTTACCGGGACTTGCTAGACACAAGAAGAATCACCTTTGTCTTGTTGCCAAGAATCACATTTGA 1500 0.3307 MVSYLHILLAFSLLLLFIFMKYKTIIKNSSFPKGPKGLPIIGYLHQLDTSNLHFQFWNLSKIYGPLFSFQIGFKKAIVISTPKLAEEILRNHDHSVSSRPPSYGTQLLSYNGIEMIFSPYNDCWREIRKICVVQFFSSKKISSFSHVRKFEVKQMLKKISNHVHSSKISNLSEIIMLVSSSIVCKIAFGKSYEPQGGEKSRFHDLLNETQAIFLSFFVSDYIPFMGWIDNLMGSIARVDNTFKGLDEFFEQVIMEHLNPNNRQKEEDEKDIVDALLELKKQGRLSIDLTNNHIKAVLMNLLVAATDTSAATSVWVMTGLMKNSRIMKKVQEEVRNLYGNKDFIDEDDIQKLVYLKAVIKETLRFYAPVPLAPRECIKSFTLNGYKIEPKTLVYVNIWAIHRDSETWKDPEEFYPERFLNSDVDFKGRDFELIPFGAGRRICPGIPMGIATVEMITANLLNSFDWEMPEGMTKEDIDIEGLPGLARHKKNHLCLVAKNHI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00213 499 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Tsu04g00213 499 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 Pfam Cytochrome P450 32 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 498 - -
Tsu04g00213 499 PANTHER CYTOCHROME P450 71B11-RELATED 7 498 - -
Tsu04g00213 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00213 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00213 Tsu-Chr4 1955128 1958233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00213 17 499 Cytochrome P450 AT4G31500 44.969 8.23e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00213 - - gmx:100806470 669.848