Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00206 ATGCCCACCTTCTCCTCTATCCCTAGgtgGATTGGTGGAAAATTGTTTGGAAAGAATCCTTCAAGCACAATCAACAACGTTGGAGACAGCGGTGATGACGCTGGAGTTGGCGTTGTAATAGACGACAATCCAGTGACAAGCGTGGTGGAGTGTTACGCTTGCACACAAGTCGGTGTGCCAGTGTTCCACTCCACCAGCTGCGATAGCGTTCACCAACCAGAATGGGAAGCATCAGCAGGTTCATACTTAGTACCAATACAAAACCGTCCCGGAAAATTCGCAAGAGCGGTTACAAGGGCAAATTGGGGACCTTTAGGAAAAGTTTTAGATCCAAGAAGCAAGCGCGTGCAAATATGGAACCGCGCGTTGTTATTAGCGCGTGGTTTTGCGTTGGCGATTGATCCTTTGTTTTTCTACGCGCTGTCCATAGGGAGAGAAGGCTCGCCGTGTTTGTATATGGATGGTGGTTTGGCGGCGGTTGTTACGGTGGCTCGTACGGTTGTTGATGCAgttcatttgtttcatgttGTGTTGCAGTTTAGATTAGCGTATGTGTCGAGAGAATCACTTGTTGTTGGATGTGGGAAACTCGTGTGGGACGCACATGCCATTGCTTCTCATTATTTGAGATCTTTCAAAGGATTTTGGtttgatgtttttgttattCTTCCTGTGCCTCAGGTTGTGTTTTGGCTAGTAGTACCAAAATTGATAAGAGAAGAGAGGATTAAAATAATTATGACAACATTgctattgatttttttgttccaATTTCTCCCTAAGGTTTACCATAGCATATCCATGATGAGAAGAATGCAAAAAGTCACTGGCTATATCTTTGGCACTATTTGGTGGGGATTTGGACTCAATCTCATAGCTTATTTCATTGCCTCTCATGTTGCTGGAGGGTGTTGGTATGTCCTTGCGATTCAACGCGTTGCATCATGCCTTCAACAGCAATGTGAAAGAAGTGTTGGATGCAATCTCTCTCTGTCATGCTCAGAGGAAATATGTTATCAGTCAATCTTACCACCAGGAACCATTGGAAATCCATGTGGTGGAAACTCAACAATGAGTAAGCCAGTGTGCTTAGATGTTGAAGGACCTTTCAAGTATGGGATCTACCAATGGGCACTTCCCGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTTGCTGGACTACTACTTTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGgcaaagaagagaaagatgcAGCTAAGATGTCGCGACATGGAATGGTGGATGAGGAGGAGGCAGCTGCCGTCCCGGTTAAGACAAAGAGTTCGGCATTTTGAACGTCAGAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAACTGATAAAAGACTTACCCGAGGGTCTGAGGAGAGACATCAAGCGTTATCTTTGCTTAGACCTCATTAAAAAGGTACCCTTATTCCATAACTTGGATGATCTTATTCTTGACAACATTTGTGACAGAGTGAAGCCCCTAGTCTTCTCTAGAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATGGTGTTTATTGTCCGTGGACGCATAAGGCGAAACCAAAGTCTCAGCAAAGGCTTGGTAGCAACAAGTGTCCTTGAACCAGGAGGCTTTTTAGGCGATGAACTTCTTTCATGGTGTCTGAGACGTCCTTTTATAGACCGGCTTCCGGCCTCCTCAGCTACATTTGTGTGTCTTGAATCAACAGAAGCATTCGGTCTTGATGCTCAAAACTTGAGGTACATAACCGATCACTTCCGGTACAAATTTGCGAACGAGAGGCTTAAGAGAACAGCGAGATATTACTCGTCGAATTGGAGAACATGGGCTGCTGTCAACATTCAACTTGCTTATAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGACACTGGAGGCACCGAGCGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATTAGGCCACATGATCATCTTGAATGA 2130 0.4347 MPTFSSIPRWIGGKLFGKNPSSTINNVGDSGDDAGVGVVIDDNPVTSVVECYACTQVGVPVFHSTSCDSVHQPEWEASAGSYLVPIQNRPGKFARAVTRANWGPLGKVLDPRSKRVQIWNRALLLARGFALAIDPLFFYALSIGREGSPCLYMDGGLAAVVTVARTVVDAVHLFHVVLQFRLAYVSRESLVVGCGKLVWDAHAIASHYLRSFKGFWFDVFVILPVPQVVFWLVVPKLIREERIKIIMTTLLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCERSVGCNLSLSCSEEICYQSILPPGTIGNPCGGNSTMSKPVCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDPVPRMVFIVRGRIRRNQSLSKGLVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDTGGTERRLLQYAAMFMSIRPHDHLE 709
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00206 709 Pfam Ion transport protein 118 440 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tsu04g00206 709 CDD CAP_ED 522 632 IPR000595 -
Tsu04g00206 709 SUPERFAMILY cAMP-binding domain-like 449 636 IPR018490 -
Tsu04g00206 709 SUPERFAMILY Voltage-gated potassium channels 110 443 - -
Tsu04g00206 709 Gene3D - 148 445 - -
Tsu04g00206 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 55 709 - -
Tsu04g00206 709 ProSiteProfiles cAMP/cGMP binding motif profile. 522 632 IPR000595 -
Tsu04g00206 709 Gene3D Jelly Rolls 520 638 IPR014710 -
Tsu04g00206 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 55 709 - -
Tsu04g00206 709 Gene3D Helix hairpin bin 448 513 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu04g00206 Tsu-Chr4 1889453 1895305 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00206 42 709 Ion Channels AT5G15410 78.708 0.0 1043
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00206 04 1889453 1895305 Tsu04g00206 04 1889453 1895305 ECH