Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00201 ATGGGGAAAGATCCACAAGTGAACCAAATATTCAACAAATCAATGACTAATGGCACCAAAATTCACATGAAAAAAATCCTTGAAATATACAAAGGATATGAGGGATTATCGACTTTGGTTGATGTTGGTGGTGGAAATGGACAAACTCTCAAAATGATTATTGAAAAATATCCATCAATAAAGGGAGTCAATTTTGATCTCCCTCAAGTGATTGAAAATGCATCACTCATTCCAGGGATTGAGCATGTTGGAGGAAGTATGTTTGAAAGTATTCCACAAGGAGATGCTATAATGCTTAAGGCAGTATGCCATAATTGGTCAGATGAAAAATGCATAGAAATTTTTAGCAATTGTCACAAAGCTTTGCCTCAAAATGGAAAGGTCATACTTGTGGAGCTTTTATTGTCAGATTATCCAGAAGCAACAAATGCATCTCGAATGATTTCAATTATTGATAATATCATGTTCATCAATGCTGGTGGAAAAGAAAGAACTGCAAAAGAATATGAAAGTTTGGCTCAACATTCTGGATTTTCAAGACTTGAAGTTGTTTGTTGTGCTTTCTCTGTTATAGGAGTGATGGAACTTCACAAATAA 597 0.3467 MGKDPQVNQIFNKSMTNGTKIHMKKILEIYKGYEGLSTLVDVGGGNGQTLKMIIEKYPSIKGVNFDLPQVIENASLIPGIEHVGGSMFESIPQGDAIMLKAVCHNWSDEKCIEIFSNCHKALPQNGKVILVELLLSDYPEATNASRMISIIDNIMFINAGGKERTAKEYESLAQHSGFSRLEVVCCAFSVIGVMELHK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00201 198 Pfam O-methyltransferase domain 2 179 IPR001077 GO:0008171
Tsu04g00201 198 Gene3D Vaccinia Virus protein VP39 8 187 IPR029063 -
Tsu04g00201 198 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 195 IPR029063 -
Tsu04g00201 198 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 198 IPR016461 GO:0008168
Tsu04g00201 198 PANTHER O-METHYLTRANSFERASE 2 198 IPR016461 GO:0008168
Tsu04g00201 198 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00201 Tsu-Chr4 1852936 1853966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00201 2 198 Monolignol Biosynthesis Gene Families AT5G54160 56.061 2.17e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00201 - - gmx:100798295 286.189