Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00200 ATGGGTTTCGGAAAGCTTAGCTTTGCATTGACTCTAAAGTGGTTGTTAATAGAGTCATGTTCTTGCTGTGATCATGACGATGTTACGGTTATTTATGAACTTTGTCCAGCTCATCTTCGTTCTTTAGTTTTTGCTGATTTGATGGGGATATCTACCCCTAGGATTAATACTAGaTATATGGTGCTTACCAACATATTTTGTATCACTGGATTTCATTGTACTAAGGTTGTATGCCATAATCAGTCAGATGAACACTGCAAAGAAATTTTAGGCAATTGTCACAAAGCTCTTCCTCCAAATGGAAAGGTCGTTATCATAGAGCTTGCACAATCAGAAGATCCAGCAGAGGCAACAAATACATCTCAGattattttgattattgatAACATCGTGTTTATCATAGTTGTTAAAAGAGAAAGAACTCCTAAAGAACATGAAAAGTTGGGTAGATTTTCTAAGCTTCGAGTTGCTTGTCGTGCTTTCTCCGTCATCGGAGTGATGGAGCTTTACAAATAA 516 0.3643 MGFGKLSFALTLKWLLIESCSCCDHDDVTVIYELCPAHLRSLVFADLMGISTPRINTRYMVLTNIFCITGFHCTKVVCHNQSDEHCKEILGNCHKALPPNGKVVIIELAQSEDPAEATNTSQIILIIDNIVFIIVVKRERTPKEHEKLGRFSKLRVACRAFSVIGVMELYK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00200 171 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 148 IPR029063 -
Tsu04g00200 171 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 74 171 - -
Tsu04g00200 171 Pfam O-methyltransferase domain 75 148 IPR001077 GO:0008171
Tsu04g00200 171 PANTHER O-METHYLTRANSFERASE 74 171 IPR016461 GO:0008168
Tsu04g00200 171 Gene3D Vaccinia Virus protein VP39 75 159 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00200 Tsu-Chr4 1848499 1849238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00200 27 171 Monolignol Biosynthesis Gene Families AT5G54160 30.405 6.57e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00200 - - gmx:100802593 111.309