Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00168 ATGATGAAAAACATTTCTAACCATGTTGCTTCttccaaaatttcaaatcttAGTGAGATTATTATGTCTGTCTCAAGCTCTATAGTTTTTAGAATTGCTTTTGGAAAAAGTTATGAAAATGAAGGAAGTGAAACAAGTAGGTTCCATGGTTTACTAGATGAGGCACAAGCTATTTCCCAATGCTTTTTCCTTTCAGATTATATTCCTTTCATGGGGTGGATTGATAAACTCACAGGATTAGTTGCTCGTGTTGATAGGATTTTTAAAGTTTTGGATGAGTTTTTTGAAGAAGTTCTTATGGAACATCTTAATCCTAATAAtaggaagagagaagaagaagataaggATATAGTTGATGTGTTACTTGAGTTAAAAAAGAAGGGTCGTCTCTCAATTGATCTTACCAATGATCACATCAAAGCTGTTATTATGAATCTAGTTTTAGCAGCTACAGGCACAAGTGCAACCACAGCAGTTTGGGTGATGACTGGACTAATGAAGAATCCAAGAGTAATGAAGAAAGCTCAAGAAGAAGTTAGAAACCTATATGACAACAAAGAGTTCATAGATGAAGATGATATTCAAAAGCTTGTATATCTCAAAGCCGTGATTAAAGAGACACTAAGATTCTATGCACCAGCACCAATGGTACCTAGAGAGACCAATCAAGGTTTTGTTCTAAATGGTTATAAAATAGAGCCAAAAACTTTAGTATATGTGAACGTTTGGGCTATTCATAGAGACCCCGAGATATGGAATGATCCAGAAGAGTTTTATCCAGAGAGATTCttaaacaataatataaattttaaaggACAAGATTTTGAATTGATTCCGTTTGGTGCAGGACGTAGAATTTGCCCTGGCATGCCATTAGGAATTGCCACAGTGGAAATTATAATTGCAAATCTTCTCAATTCATTTGATTGGGAAACGCCTAAAGGTATGACAATAGAAGATATAGACACTGAAGGGCTACCAGGACTTACTAGTCACAAGAAGAATCATCTTTGCCTTGTTGCCAAGAATCACATGTGA 1038 0.3362 MMKNISNHVASSKISNLSEIIMSVSSSIVFRIAFGKSYENEGSETSRFHGLLDEAQAISQCFFLSDYIPFMGWIDKLTGLVARVDRIFKVLDEFFEEVLMEHLNPNNRKREEEDKDIVDVLLELKKKGRLSIDLTNDHIKAVIMNLVLAATGTSATTAVWVMTGLMKNPRVMKKAQEEVRNLYDNKEFIDEDDIQKLVYLKAVIKETLRFYAPAPMVPRETNQGFVLNGYKIEPKTLVYVNVWAIHRDPEIWNDPEEFYPERFLNNNINFKGQDFELIPFGAGRRICPGMPLGIATVEIIIANLLNSFDWETPKGMTIEDIDTEGLPGLTSHKKNHLCLVAKNHM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00168 345 PRINTS E-class P450 group I signature 241 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 277 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 138 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 158 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 287 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 Coils Coil 172 192 - -
Tsu04g00168 345 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 345 - -
Tsu04g00168 345 SUPERFAMILY Cytochrome P450 3 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PANTHER CYTOCHROME P450 71B11-RELATED 1 345 - -
Tsu04g00168 345 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 280 289 IPR017972 GO:0005506|GO:0016705
Tsu04g00168 345 PRINTS P450 superfamily signature 202 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS P450 superfamily signature 278 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 PRINTS P450 superfamily signature 149 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 Gene3D Cytochrome P450 1 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00168 345 Pfam Cytochrome P450 1 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00168 Tsu-Chr4 1607442 1609098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00168 1 345 Cytochrome P450 AT4G31500 46.307 1.94e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00168 - - gmx:100806470 493.812