Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00167 ATGGTGTCATTTCTTCACATACTTCTAGCTTTTCCtttattgatatttttccttttcgtaaaatacaaaacaattaCCAAAAAATCATCAACCCTTCCAAAAGGTCCAAAAGGCCTTCCAATAATTGGCAATCTTCATCAACTTGATAGTTCAAaattacatgttcaattttggAAACTCTCAAAAATCTATGGTCCTCTTTTATCTCTTAAAATTGGTTTCAAACATGCAATTGTTGTTTCATCACCTAAACTAGCTAAAGAAATTCTTAAAGATCATGACCATGATGTTTGTAGTAGACCACCTTCATATGGTACACAAAAATTGTCTTACAATGGCTTAGATATGATATTTTCACCTTACAATGATTGTTGGagagaaataagaaaaatttgtgTTGTCCATTTTTTTAGCTCCAAAAAAATTTCTAGCTTTTCACATGTGAGAAAATTTGAGGTCAAACAAATGATGAAAAACATTTCTAACCATGTTGATTCTTCCAAAATTTCAAACCTTAGTGAGATTCTAATGTCTGTCTCAAGCTCTATAGTTTGTAGAATTGCTTTTGGAAAAAGTTATGAAAATGAAGGGGGTGAGAAAAGTAGGTTTCATGGTTTACTTAATGACACACAagctatttttctttctttttttgtttcggACTATATTCCTTTTATGGGGTGGATTGATAAACTCACCGGGTTAGTTGCTCGTGTTGATAACACTTTTAAAGCTTTGGATGAGTTTTTTGAAGAAGTTCTTAAGGAACATCTTGATCCTAAGAAtaggaagaaagaagaagaagaaaaggataTAGTTGATGTGTTGCTTGAGTTAAAAAAGAAGGGTCGTCTCTCAATTGATCTTACCAATGATCACATCAAAGCTGTTATTATGAACCTACTTGTAGCAGCTACAGACACAAGTGCAGCCACATCAGTTTGGGTGATGACTGGACTAATGAAGAATCCAAGAGCAATGAAGAAAGCACAAGAAGAAGTTAGAAACCTCTATGGCAACAAAGAGTTCATAGATGAAGATGATATTCAAAAGCTTGTATATCTCAAGGCCGTGATAAAAGAGACACTAAGATTCTACGCACCGGCACCGATGGTACCAAGAGAGACCAATCAAGGTTTCATTCTAAATGGCTATAAAATAGAGCCAAAAACGTTAGTATACGTGAATGTTTGGGCTATTCATAAGGACCCTGAGACATGGAATGATCCAGAAGAGTTTTATCCGGAGAGATTTTTAAACAATGACATAGATTTTAAAGGACAAGATTTTGAATTGATTCCATTTGGTGCAGGGCGTAGAATTTGTCCCGGCATACCATTAGGAATTGCCACAGTGGAAATCATAACTGCAAATCTTCTCAATTCATTTGATTGGGAAATGCCTGAAGggatgacaaaagaaaatatagacATTGAAGGGCTACCAGGACTTGCTAGTCACAAGAAGAATCATCTTTGCCTTGTTGCCAAGAATCACATGTGA 1503 0.322 MVSFLHILLAFPLLIFFLFVKYKTITKKSSTLPKGPKGLPIIGNLHQLDSSKLHVQFWKLSKIYGPLLSLKIGFKHAIVVSSPKLAKEILKDHDHDVCSRPPSYGTQKLSYNGLDMIFSPYNDCWREIRKICVVHFFSSKKISSFSHVRKFEVKQMMKNISNHVDSSKISNLSEILMSVSSSIVCRIAFGKSYENEGGEKSRFHGLLNDTQAIFLSFFVSDYIPFMGWIDKLTGLVARVDNTFKALDEFFEEVLKEHLDPKNRKKEEEEKDIVDVLLELKKKGRLSIDLTNDHIKAVIMNLLVAATDTSAATSVWVMTGLMKNPRAMKKAQEEVRNLYGNKEFIDEDDIQKLVYLKAVIKETLRFYAPAPMVPRETNQGFILNGYKIEPKTLVYVNVWAIHKDPETWNDPEEFYPERFLNNDIDFKGQDFELIPFGAGRRICPGIPLGIATVEIITANLLNSFDWEMPEGMTKENIDIEGLPGLASHKKNHLCLVAKNHM 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00167 500 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tsu04g00167 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 Coils Coil 327 347 - -
Tsu04g00167 500 PANTHER CYTOCHROME P450 71B11-RELATED 6 500 - -
Tsu04g00167 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 500 - -
Tsu04g00167 500 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00167 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00167 Tsu-Chr4 1601700 1605319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00167 16 500 Cytochrome P450 AT4G31500 47.358 6.73e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00167 - - gmx:100806470 712.22