Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00155 ATGGAAGGAGAAAGTGATAAGTGGCAGCAGAAGTGTGATGAAGATGTGGCTCTGAATATTCCTCTAATAGGTGCAGAACATGAAGGTCCCAACAACAATGTTACCACATCCTTACTTAAAACTTGTTTCAATGGTCTCAATGCTTTATCAGGTGTTGGAATATTATCAGTTCCTTATGCTTTAGCCTCAGGAGGATGGTTAAGTTTAgcacttttattttctattgcAGCAGTAGCATTTTACTCAGGCATATTAATGAAAAGATGCATGGAAAAAAATTCCAACATAAGAACATATCCTGATATAGGTGAACTTGCATTTGGAAAAACAGGAAGATTAATAGTATCAATTTCAATGTACACAGAACTGTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGAGATAATTTAAGTAACTTATTTCCAATTGAAGATTTTCAAGTGGTTGGTTTATCAATTGGTGCAAAGCAATTCTTTGTGATATTGGTTGCATTAATTATTTTGCCAACAATTTGGTTAGATAATTTGAGTCTTCTTTCTTATGTATCTGCAAGTGGTGTATTTGCTTCAATAatcataattttgtcaataGCATGGACTGGAGCATTTGATGGAGTTGATTTTCATGAAAAGGGTGATATTGTAAATTGGAATGGGATCCCTACAGCTGTTAGCTTGTATGCTTTTTGTTATTGTGCTCATCCAGTCTTCCCTACTCTCTACAATTCCATGAGGAACAAACATCAATTCTCTAATGTCCTAATTGTATGCTTTATAATAACCACTATTGGTTATGCATCAATGGCTATAATTGGTTACTtaatgtttggttcaaaagttGAATCacaaataacattaaatttacCACTAAACAAAATAAGTTCAAGAATAGCAATATACACAACTTTGGTTAATCCAATAACCAAATTTGCTTTGATGGCAACACCAATTACAAATGCTTTGAAAGATTTACTTCCAAGGACATACAAGAATAACAAAGTGACCAACATCTTAGTGAGTACTGTTCTTGTTATTAGCACTGTTATTGTTGCATTGAGTGTTCCTTTCTTTGGTTCTCTCATGTCATTGGTTGGAGCATTTTTAAGTGTCACTGCCTCTATTTTGCTTCCTTGCTTGTGCTACTTGAAGATTTCTGGCACTTATAGGAAATTTGGGTTTGAGACATTTGCTATTGTGGTGATAATATTAGTAGCTATAGTAATGGGAATATCTGGGACATATACTTCAGTTATtgaaataatacaaaatttgtAA 1278 0.3192 MEGESDKWQQKCDEDVALNIPLIGAEHEGPNNNVTTSLLKTCFNGLNALSGVGILSVPYALASGGWLSLALLFSIAAVAFYSGILMKRCMEKNSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNLFPIEDFQVVGLSIGAKQFFVILVALIILPTIWLDNLSLLSYVSASGVFASIIIILSIAWTGAFDGVDFHEKGDIVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLIVCFIITTIGYASMAIIGYLMFGSKVESQITLNLPLNKISSRIAIYTTLVNPITKFALMATPITNALKDLLPRTYKNNKVTNILVSTVLVISTVIVALSVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGFETFAIVVIILVAIVMGISGTYTSVIEIIQNL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00155 425 Pfam Transmembrane amino acid transporter protein 35 415 IPR013057 -
Tsu04g00155 425 PANTHER AMINO ACID TRANSPORTER AVT1J 36 422 - -
Tsu04g00155 425 PANTHER OS05G0424000 PROTEIN-RELATED 36 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00155 Tsu-Chr4 1498858 1506792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00155 26 422 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.045 2.39e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00155 K15015 - gmx:100794374 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00155 04 1498858 1506792 Tsu04g00155 04 1498858 1506792 ECH