Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00154 ATGAAAGAAACCAAATTTCAGGTAGCTGTTCCAACAACAATGTCACCACCGCATCTTTCCTTAAAACTTGTGTCAATGGCCTCAATGCTTTATCAGGTAACCTTATACtttttgttacaaaatatgtcagaaaaacttgaaaacaactATCAAATATTAAATGTGCCTTTACTATCTGAGTGGAAGCTAGGACATTCCATAGATGAGGAGAAAATCATAGCCTCTCATCCTTCAGATAAAAATACAGTATCTTTCTATCGAACATGTTTTAATGGAGTCAATACAATTTCAGGTGTTGGAATACTATCAGTTCCATTTGCTTTAGCCTCTGGAGGATGGTTAAGTTtggcatttttattttctatagcaGCAGTAGCATTTTACTCAGGCTTATTAATAAAAAGATGCATGGAAAAAAATTCCAACATTAGAACTTATCCTGAAATAGGTGAACTTGCATTTGGAAAAACAGGAAGATTAATAGTATCAATTTCAATGTACACAGAACTCTACTTGGTTTCAGCAGGGTTTTTGATTCTAGAAGGAGATAATTTAAGTAACTTATTTCCAATGGAAGAGTTTCAAGTTGTTGGTTTATCAATTGGtgcaaaacaattttttgtgaTATTGGTTGCAATAATTATTTTGCCAACAGTTTGGTTAGATGATTTAAGTTTACTTTCTTATGTATCTGCAAGTGGTGTTTTTGCTTCTATAatcataattttgtcaataGCATGGACTGGAGCATTTGATGGAGTTGGCTTTCATGAAAAGGGTAATATTGTAAATTGGAATGGGATTTCTACATCTGTTAGCTTGTATGCTTTTTGTTATTGTGCTCATCCAGTCTTCCCTACTCTCTACAATTCCATGAGGAACAAACATCAATTCTCTAATGTCCTAATTGTATGCTTTATATTAACCACTCTTGGTTATGCATCAATGGCTATAGTTGGTTATTtaatgtttggttcaaaagttGAATCACAAGTAACATTAAACTTACCAATAAACAAAGTAAGTTCAAGAATAGCAATATACACAACTTTGGTAAATCCAATTTCTAAATTTGCTTTAATGGCAACACCAATTACAAATGCTTTAAAAGAATTACTTCCAAGTACATACAAGAATAACAAAGTGACCAATATCTTTGTTAGTACTGCTCTTGTAATTAGCACTGTAATTGTTGCTTTAAGTATTCCTTTTTTTGGGTATCTCATGTCATTAGTTGGAGCATTTTTAAGTGTCACTGCCTCAGTTTTACTTCCTTGCTTGTGCTACTTGAAGATTTCTGGCACTTATAGGAAATTTGGGTTTGAGACATTTGCCATTGTGGTAATAATATTAGCTGGAATAGTAATGGGAATATATGGGACATATACTTCAATTGTTGAAATAATACAAAGTTTACACTCCTCAGATTTCAGACCACTAGATAAAATAACAACCCGactcataaaaatatttggCTTATTTTCTGCCGGAATTGCATTGAAAACTGGTTCGCCGCCTGCGGTAAACCCCGTCACATGTCCTTCTTGTAGAGCTGGTTTACTCACAATAGATGACATGTTCTCCGAAACAAGGCCAGCTACTAAGTTGGAAACTCTGATGCAACTTCTGCAAGGAGACACCACCTCTACCAAGTCGGTTGTATTTTCACGTTATGACAATGCACTGGAATATTTTCTTGTGCATTTGCATCTTGCTGGTTTCAATACTACCAAAACAATTGAATACTCTGCATATAATATcaagaaatttgaaaacataGATGGACCAGTAGTCTTGTTGATCGACATTGAGACTGCTCGGAAAAATCATATATTCATAAATGTTGCAGTAGTAAAATAG 1860 0.3204 MKETKFQVAVPTTMSPPHLSLKLVSMASMLYQVTLYFLLQNMSEKLENNYQILNVPLLSEWKLGHSIDEEKIIASHPSDKNTVSFYRTCFNGVNTISGVGILSVPFALASGGWLSLAFLFSIAAVAFYSGLLIKRCMEKNSNIRTYPEIGELAFGKTGRLIVSISMYTELYLVSAGFLILEGDNLSNLFPMEEFQVVGLSIGAKQFFVILVAIIILPTVWLDDLSLLSYVSASGVFASIIIILSIAWTGAFDGVGFHEKGNIVNWNGISTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLIVCFILTTLGYASMAIVGYLMFGSKVESQVTLNLPINKVSSRIAIYTTLVNPISKFALMATPITNALKELLPSTYKNNKVTNIFVSTALVISTVIVALSIPFFGYLMSLVGAFLSVTASVLLPCLCYLKISGTYRKFGFETFAIVVIILAGIVMGIYGTYTSIVEIIQSLHSSDFRPLDKITTRLIKIFGLFSAGIALKTGSPPAVNPVTCPSCRAGLLTIDDMFSETRPATKLETLMQLLQGDTTSTKSVVFSRYDNALEYFLVHLHLAGFNTTKTIEYSAYNIKKFENIDGPVVLLIDIETARKNHIFINVAVVK 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00154 619 PANTHER OS05G0424000 PROTEIN-RELATED 79 469 - -
Tsu04g00154 619 PANTHER AMINO ACID TRANSPORTER AVT1J 79 469 - -
Tsu04g00154 619 Pfam Transmembrane amino acid transporter protein 82 465 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00154 Tsu-Chr4 1490102 1496138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00154 69 472 Amino Acid or Auxin Permease AAAP Family AT3G28960 56.436 9.02e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00154 K15015 - gmx:100794374 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00154 04 1490102 1496138 Tsu04g00154 04 1490102 1496138 ECH