Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00067 ATGGAGATGCAAGGTGTTCGCGGCCCGAAACCTCGGTTCTTCACCGGCAACATCTTGGACATGGCTTCCCTTGTTTCCAAATCAACCTCACATGACATGAAAATAATAAGCCATGACATTGTCGGTCGTCTTCTTCCTCATTTTCTTCTCTGGTCCTCCCAATTTGgaaaaagatatatatattggaATGGTCCAGAGCCAAGGTTGTGTTTGACAGAAACAGAATTGATCAAAGAGTTTCTTTCAAAATACAGTACAGTATCTGGTAAATCATGGCTCCAAAAACAGGGTTCAAAACATTTCATAGGTGAAGGAGTTTTGATGGCAAATGGTGAAAATTGGTATCACCAACGTCACATTGTTGCCCCTGCATTCATGGGCGACAGACTTAAGAGCTATGCAGGACATATGGTGGAATGCACTAAAGAGATGCTGCACTCACTAGAAAAAGGACTAGAGTGTGGACAAAGTGAGGTGGAGATTGGTGAGTACATGACTAAACTAACTGCAGATATTATCTCAAGAACTGTGTTTGGTACAAGTTACCAAAAGGGAAAGAAAATATTCCATCTACTCACTGCTCTTCAGAGTCGTTGTGCTCAAGCAAGTCGCCATCTTTGCTTTCCTGGAAGCAGGTTTATCCCAAGCAAGTACAACAGAGAAATAAAGTCATTGAAGATGGAAGTGGAGAGACTATTGATGGAAATAATACAAAGTAGGAAAGATTGTGTTGAGATTGGAAGAAGCAATTCTTATGGGAATGATTTATTGGGGATACTATTAAATGAAatgcaaaaaaaagaaagtagcTTAAATTTGCAAGTAGTAATGGATGAAtgcaaaacatttttcttttcaggACATGAAACAACAGCACTTTTACTCACTTGGACAGTTATGTTACTAGCAATTAATCCATCTTGGCAAGAAAAGGTTAGAGCTGAGGTTAAAAGGGTTTCCAATGGGGGAATTCCCTCTTTGGATCAACTCTCCAAACTCACTATGTTGCATATGGTAATCAATGAGTCATTGAGGCTCTATCCTCCAGCATCTGTGCTCCCTAGAATGGCCTTTGAAGACATAATATTGGGTGACCTTTATATACCTAAAGGGTTATCAATTTGGATTCCTGTTTTGGCTATTCATCATAGTGAAAAATTATGGGGTAAAGATGCAAATGAATTCAATCCAGAGAGGTTTACTTCAAAATCATTCATTCCTAGCCGTTTTTTACCATTTGCTTTTGGGCCAAGAAATTGTGTTGGACAAACATTTGCCTTAATGGAAGCTAAAATTATATTAGCTATGTTAATCTCTCGATTTAGCTTCACAATTTCGGATAATTATCGTCATGCACCTGTCGTTGTGCTCACAATTAAGCCCAAATATGGTGTTCAAGTTTGTTTGAAGCCTTTGGTGCCATGA 1425 0.3754 MEMQGVRGPKPRFFTGNILDMASLVSKSTSHDMKIISHDIVGRLLPHFLLWSSQFGKRYIYWNGPEPRLCLTETELIKEFLSKYSTVSGKSWLQKQGSKHFIGEGVLMANGENWYHQRHIVAPAFMGDRLKSYAGHMVECTKEMLHSLEKGLECGQSEVEIGEYMTKLTADIISRTVFGTSYQKGKKIFHLLTALQSRCAQASRHLCFPGSRFIPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSNSYGNDLLGILLNEMQKKESSLNLQVVMDECKTFFFSGHETTALLLTWTVMLLAINPSWQEKVRAEVKRVSNGGIPSLDQLSKLTMLHMVINESLRLYPPASVLPRMAFEDIILGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSFIPSRFLPFAFGPRNCVGQTFALMEAKIILAMLISRFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLVP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00067 474 Coils Coil 222 242 - -
Tsu04g00067 474 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 468 - -
Tsu04g00067 474 Pfam Cytochrome P450 54 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 Gene3D Cytochrome P450 1 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 468 - -
Tsu04g00067 474 SUPERFAMILY Cytochrome P450 8 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00067 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00067 Tsu-Chr4 674873 680569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00067 1 334 Cytochrome P450 AT5G38450 68.142 4.41e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00067 K10717 - gmx:100808392 868.226