Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00063 atgattatcACAACCCTTTTGGCCATTTTTGTGgctctattttttaaaattgtttatgaTACAATCTCATGTTATGTGCTTAATCCAATACGTATCAAGAAGATTATGGAGAAGCAAGGTGTGTGTGGCCCAAAAGCACGTTTTCTAACTGGCAACCTTAATGAAATCTCCTCCTTCGTGTCCAAAACTACTTCTCAAGACATGAAAACAATCAACCATGACATTGTTGGTCGTCTTTTGCCTCATTTTGTTGCTTGGTCTAACCAATATGGAAAGAGATTCTTATATTGGAATGGAATTGAGCCTAGGATGTGCCTAACAGAGGCTGGATTGATCAAGGAGTTTCTTTCAAAGTACAGCACCATATCTGGAAAATCATGGCAGCAACAACAAGGGACCAAGCATTTTATTGGAAAAGGCTTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACCTAGTTTCCCCTGCATTCATGGGAGAAAGACTCAAGAGCTATGCTAGTCACATGGTGGAATGCACTAAGGAGATGCTTGAATCTCTAAAAAATGCAACATTGGAATGTGACAAAAATGAAGTGGAAATTGGAGAGTACTTCACTGAACTAACTGCAGATATTATCTCTAGAACTGAATTTGGTACAAGCTACAAAAAGGGAAAGCAAATATTTTCCCTTCTTACACAGCTCCAAGCTCTTTCTGCTCAAGCTAGTCGCCAACTTTGTCTTCCTGGAAGTAGGTTTTTTCCTAGTACTTATAATAGAGAGATTAAGTCATTGAAGATGGAGACGGAGAGACTCTTGACGGAGATAATACAAAGTAGAAAGGATTGTGTGGAGATGGGAAGAAGCAATTCTTATGGGAATGACTTATTGGGCATGCTTTTAGATGAGGTCCAAAAGAGTGGTAGCTTAAACCTACAATTAGTTATGGATGAATGCAAAACATTCTTTTTTGCAGGACATGAAACAACTGCACTCTTACTTACATGGACTGCTATGTTACTTGCTAGCAATCCAAGTTGGCAAGAAAAAGTCAGAATCGAAGTCAAAGAAATTTTCAATCAAGGAATACCTTCTATTGATCAACTCTCCAAACTCAATGTGTTGCATATGGTAATTAATGAGTCAATGAGGCTCTATCCTCCAGCAACATTGCTCCCTAGAATGGCCTTTCAAGACATTGTTTTAGGTGACCTTTATATTCCTAAAGGCTTATCAATTTGGATTCCAGTTTTAGCTATTCATCATAGTGAAGAATTATGGGGTAAAGATGCAAATGAATTCAACCCACAAAGATTTGCTTCAAAATCATTCATGCCTGGTCGATTCATACCTTTTGCTTCTGGTCCAAGAAATTGTGTTGGACAATCATTTGCTATGATGGAAGCTAAGATTATATTGGCAATGTTGATCTCTAAGTTTAGCTTCACTATTTCAGAGAATTATAAGCATGCACCAATCACTGTCCTCACAATTAAGCCTAAATATGGTGTTCAAATTTGTTTGAAGCCTTTAGATGCATAA 1530 0.3732 MIITTLLAIFVALFFKIVYDTISCYVLNPIRIKKIMEKQGVCGPKARFLTGNLNEISSFVSKTTSQDMKTINHDIVGRLLPHFVAWSNQYGKRFLYWNGIEPRMCLTEAGLIKEFLSKYSTISGKSWQQQQGTKHFIGKGLLMANGEDWYHQRHLVSPAFMGERLKSYASHMVECTKEMLESLKNATLECDKNEVEIGEYFTELTADIISRTEFGTSYKKGKQIFSLLTQLQALSAQASRQLCLPGSRFFPSTYNREIKSLKMETERLLTEIIQSRKDCVEMGRSNSYGNDLLGMLLDEVQKSGSLNLQLVMDECKTFFFAGHETTALLLTWTAMLLASNPSWQEKVRIEVKEIFNQGIPSIDQLSKLNVLHMVINESMRLYPPATLLPRMAFQDIVLGDLYIPKGLSIWIPVLAIHHSEELWGKDANEFNPQRFASKSFMPGRFIPFASGPRNCVGQSFAMMEAKIILAMLISKFSFTISENYKHAPITVLTIKPKYGVQICLKPLDA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00063 509 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 503 - -
Tsu04g00063 509 Gene3D Cytochrome P450 41 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 Pfam Cytochrome P450 83 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g00063 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 503 - -
Tsu04g00063 509 SUPERFAMILY Cytochrome P450 75 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00063 Tsu-Chr4 631917 639718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00063 2 368 Cytochrome P450 AT5G38450 66.220 8.17e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00063 K10717 - gmx:100812567 839.336