Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00055 ATGACTACAATTTCATTCCACCACAACAACCCAAAACCAAACAACATTCATCACCAAAAGGGACTCATTATTGAAGAAATTGAAGGACTCATAAAAGTTCACAAAGATGGACATGTAGAAAGACCACAGATTGTTCCCAATGTCTCATGCAAATTTCCATCAGAAAATGGTGTAACTTCAAGAGACATTACAATcaacaaagaaacaaatttgTGGACACGTGTCTATCTCCCAACATCAACATTAACCTctcacaacaacaataacaagcTTCCATTGCTTGTTTATTTCCATGGTGGTGGATTTTGTGTTGGTTCTGTTTCTTGGATTTGTTACCACGAATTCTTAAACAACCTTGTTTTGAAGGCCAATTGCGTGGTTGTGTCGGTTAATTATCGGTTAGCCCCTGAAAACCGTCTTCCATCTGCTTACGACGATGCTTTCAATGCTCTCGTGTGGATCAAACATGAAgctttatataataaaaaccaaAGTTGGTGGTTGAAACATTGCAacatttcttctctttttctatGCGGTGACAGCGCCGGAGCTAATATAGCTTTCAATGTTGTCGCTACGCGGTTTggatcaaattcaaatttgaatccATTATCTTTAAAAGGTGTTATATTGATTCAACCTTTTTTCGgaggagaagaaagaacaaATTGCGAGAAACATTTACATCAACCACAAAATTCAGCGCTTAGTTTATCGGTTTCAGATATTTATTGGCGATTATCACTTCCTATTGGAGTTTTGGTTACGCGCGACCATCCTTATTGTAATCCTCTAGCAAGTGGAATCGCTAAACTGAGAGATTTAAGGATTCCTTCTATTATGATATGTGTTTCGGAATTGGATATACTTAGAGATAGGAACTTGGAGTTTTCGAATTGTCTGGTTAAGGCCGGAAAAAAGGTTGAAACTTTTGTGTATAAAGGTGTTGGACATGCATTTCAAGtgttgcataattatcaacTTTCTCATGTTAGGACACAAGAAATGGTATCTCATATCAAGAACTACTTGAATCAGTGA 1044 0.3305 MTTISFHHNNPKPNNIHHQKGLIIEEIEGLIKVHKDGHVERPQIVPNVSCKFPSENGVTSRDITINKETNLWTRVYLPTSTLTSHNNNNKLPLLVYFHGGGFCVGSVSWICYHEFLNNLVLKANCVVVSVNYRLAPENRLPSAYDDAFNALVWIKHEALYNKNQSWWLKHCNISSLFLCGDSAGANIAFNVVATRFGSNSNLNPLSLKGVILIQPFFGGEERTNCEKHLHQPQNSALSLSVSDIYWRLSLPIGVLVTRDHPYCNPLASGIAKLRDLRIPSIMICVSELDILRDRNLEFSNCLVKAGKKVETFVYKGVGHAFQVLHNYQLSHVRTQEMVSHIKNYLNQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00055 347 Gene3D alpha/beta hydrolase 16 346 IPR029058 -
Tsu04g00055 347 SUPERFAMILY alpha/beta-Hydrolases 24 345 IPR029058 -
Tsu04g00055 347 PANTHER ARYLACETAMIDE DEACETYLASE 10 344 - -
Tsu04g00055 347 Pfam alpha/beta hydrolase fold 94 322 IPR013094 GO:0016787
Tsu04g00055 347 PANTHER CARBOXYLESTERASE 6-RELATED 10 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00055 Tsu-Chr4 566076 567119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g00055 1 346 Carbohydrate Esterase AT5G16080 50.000 3.17e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00055 - - gmx:100819429 489.574