Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03615 ATGGAATCTAGTTCCAGCCACCATGAAGCTTGCCATATCAATCATCTTTTCGACCTCAAGCTGATGTGGCTCTTGGTTGATACTAATCTAGATACTTCGAGCCCTGATACTTATAGACCACCTCCTTCTCCTCTCCCTTTCAATGTGACATCTGGTGCCACTCAAACTGCACCTGTGGCTCTAGAAATTAGCTGTGACAAGAACAATACACCCTTGCTTTCTACAAATTCTAATTCAGTTCAAGAACCATCTGAAGATAATCACGGAACCTCAGCTAAGTCGGACGAACCAAAGGAATCAGAATGCAAAGGTCGGACTGATTTAGAGCTAGACTCGGCAAAGGATCCTGAAATTGAACTTTCAAAGTTGGAAGTGAATCTTGCCCTGTCCGCGATCAGGATAAGGAGAAGATTTCTCCAGCACATATTTTTCCTGCTGAGGTGTGAGACGGATCATGTTCAAAATGAGATTCTATGTGGTGAAGATTTAAAGCTAATATCGAGAGTGGAGACTTGA 516 0.4283 MESSSSHHEACHINHLFDLKLMWLLVDTNLDTSSPDTYRPPPSPLPFNVTSGATQTAPVALEISCDKNNTPLLSTNSNSVQEPSEDNHGTSAKSDEPKESECKGRTDLELDSAKDPEIELSKLEVNLALSAIRIRRRFLQHIFFLLRCETDHVQNEILCGEDLKLISRVET 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03615 171 MobiDBLite consensus disorder prediction 68 110 - -
Tsu03g03615 171 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 23 124 - -
Tsu03g03615 171 MobiDBLite consensus disorder prediction 88 110 - -
Tsu03g03615 171 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 23 124 - -
Tsu03g03615 171 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03615 Tsu-Chr3 49495935 49499002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03615 24 122 C3H Transcription Factor Family AT5G41350 38.000 2.91e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03615 - - gmx:100790079 145.976