Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03601 ATGATAAACTTTGGTAAAAAGTTGCAACATCTTTGTTGTTTAATTCGCAACAACATTCATGGTTCATTGACTCGTGCTTTAACATTCAACAACTTCTTCATTCAACTTTGTTATTTCATTATCCTTTCTCTATTTGGTTACTTGGGTCTCAAGCTTTCAAAGCCAAGATCTTCTTTTAGACCCAATGACTTTGATCTTTTTTACACCTCCGTTTCTGCTTCCACTGTTTCTAGCATGACATCAATAGAAATGGAAGTTTTCTCAAATTCCCAACTCATTTTTCTTACCTTTCTTATGTTAGTCGGTGGTGAAGTTTTTACTTCCATGCTTCAACTTTTTGTTGATAGGTTCAATTTCACCCAAAAAATTCAATGTGTCAAAAATGAATGTAGTAGTTGTTATAGTagtaaaatcaatcaaattgaaCTTGGTTTGATTTCTATTCCTCAATCAGAAAATCATGctcaaattgataaaaataatattatcgaTAAAGATAAACTTAAGTATAATTCACTTAGGTATCTAAGTTATGTAGTTTTGTGTTACCTTATGGTGgttcatttttttggttttagtttgGTCACTTTGTACATAACCTATATACCAAGtgctaaaaatatactaaaaaacaAAGGCATCAAGATAGaaacattttctttatttacCATAGTTTCAACATTTGCAAGTTGTGGTTATGTACCTACAAATGAGAACATGATGGTTTTCAAGAAGAATTCAGGACTTCTACTTCTTATACTTCCACATGTACTTTTAGGGAATACCCTATACGCACCATGTTTGAGACTATTAATAACGGTTTTGAAAAGTGTTACTAATAGAGAGGAATTCTCTTACTTGCTAAataattcaaagaaaatagGTTATGACCATTTGCTCTCTCCTCTTCATTGTTGGAACCTTGTTGGCACAGTATTTGGTTTCAATGTGATACAATTTCTACTGTTTTGTTCAATGGAGTGGAGTTCCAAGATTATGGAAGGACTAAATCTCTATCAAAAAGTAGTAGCATCTTTGTTTCAAGTTACAAATGTTAGACATTCCGGTGAATCTGTTTTTGATACATCCTCTATCTCTTCAGCCATATTGGTGCTCTTTGTTGTCATGATGTATCTCCCACCATACACCACATTTTTACCCATAAGGGACCACGAAAATGATGTGAATAAAGACCAAAAAAGCCTAGTAGAGTGTATTTTATTCTCTCAGCTCTCTTACTTGGTTATTTTCATTATTCTCATTTGCATCACCGAAAGACAATGCTTAAAAGACGATCCCCTCAACTTCAATGTCTTGACCGTCACCCTAGAAGTCATCAGTGCTTATGGGAACGTAGGGTTGTCGACAGGATATAGCTGCTCGAGGCAATTGAAACCGAAATTAACGTGCAAAGATTCATGGATTGGATTTTCAGGAAAGTGGAGTACCGAAGGGAAATTGATCCTTATCTTTGTAATGTTCTTTGGTAGGCTCAAGAAATTCAACATGAATGGAGGCAAAGCATGGCACCTGtcctaa 1539 0.3255 MINFGKKLQHLCCLIRNNIHGSLTRALTFNNFFIQLCYFIILSLFGYLGLKLSKPRSSFRPNDFDLFYTSVSASTVSSMTSIEMEVFSNSQLIFLTFLMLVGGEVFTSMLQLFVDRFNFTQKIQCVKNECSSCYSSKINQIELGLISIPQSENHAQIDKNNIIDKDKLKYNSLRYLSYVVLCYLMVVHFFGFSLVTLYITYIPSAKNILKNKGIKIETFSLFTIVSTFASCGYVPTNENMMVFKKNSGLLLLILPHVLLGNTLYAPCLRLLITVLKSVTNREEFSYLLNNSKKIGYDHLLSPLHCWNLVGTVFGFNVIQFLLFCSMEWSSKIMEGLNLYQKVVASLFQVTNVRHSGESVFDTSSISSAILVLFVVMMYLPPYTTFLPIRDHENDVNKDQKSLVECILFSQLSYLVIFIILICITERQCLKDDPLNFNVLTVTLEVISAYGNVGLSTGYSCSRQLKPKLTCKDSWIGFSGKWSTEGKLILIFVMFFGRLKKFNMNGGKAWHLS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03601 512 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 22 512 - -
Tsu03g03601 512 PANTHER SODIUM TRANSPORTER HKT1 22 512 - -
Tsu03g03601 512 Pfam Cation transport protein 86 383 IPR003445 GO:0006812|GO:0008324|GO:0055085
Tsu03g03601 512 Pfam Cation transport protein 407 499 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03601 Tsu-Chr3 49322427 49328557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03601 51 511 Inorganic Solute Cotransporters AT4G10310 48.233 4.56e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03601 K24976 - gmx:100779582 690.263