Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03597 ATGGAGATCTTAGGTTGTTTTATCCAAAAGTTGCAACTCCTTTGTAACACTTCATGTCGAAAACTTGCATGTCTaaccaaatcaatttttttcctaaCATCATATTTTTATCGCTTCATCTTGCTAAGAGCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTTGGGTTTGGATTTCTCAAAGCTCTAAACCCTCCTTTAGATCATACAACTAAAAACTTAGATTTGTTCTTCACATCAGTTTCAGCCACCACAGTTTCAAGCATGTCCACAGTTGAAATGGAAACTTTTTCTAATCCTCAACTAATCATCATTACCATCTTAATGTTCATAGGTGGTGAAGTCTTCACTTCAATGGTAGGGCTTCATTTCGTTAGATCAAGACTCAAAACTAGTCTCGACAAAATCGATACATCTCATGGACGTCTTGCTTCTACAAACTCCACCATTCTTGATCTTGAACTTGAAATGGTCTCAAACGAGGTACACAATAAATCACATGAACCTTTCAATACCAACACTACTACAAGTGAAAATTTGAGGTACTCATCTATGAAATATTTGGTTTATGTAATTCTTGGTTACATTGTAATTCTCCATATTATAGGTCTATTTGGTATTTCTATTTACCTTGCAATGATTCCTAGTGCCAAACAAGTACTAAGAAACAAGGGTCTAAACATGTCCACATTCTCTGTTTTTACTATAGTTTCAACTTTTTCTAATTGTGGATTTGTTCCAACGAACGAAAACATGATTGTTTTTAGACGAAATTCGGGACTACTTCTTATTCTGATTCCACAAATACTTCTTGGGAATACAATTTACCCTCCATGCTTGAGATTTTGTATATGGGTATTGGGAAAATTTTACAAGAAAAAAGAGTGTAATTATCTTTTGAAGAATTCAGAGGAAGTTGGTTACAAACATTTGTTACAGGGGAGACACTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTTGTTGTGATTCAAGTTACATTGTTTTCTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGATTGAATTATTATGAGAAAATGATTGGTGTACTCTTTCAAAGTGTGAATTCAAGACACGCTGGAGAAAGTATTATGGACCTCTCAATTCTTTCACAAGCCATCTTGGTACTATTTGTCTTCATGATGTACCTTCCTCCTTACACCTCATTCCTCCCATTAAAAGATAATAATGGGAAAACTTCACAAAGCAGTGACAGGATGAAAAAGAGAAGAGGAAAAGTTAcagaaattttgatattatcTCGACTCTCCATTCTAGTCATATTCATAATACTAGTGTGCATAACTGAGAGGCAACAATTGAAGGATGATCCTCTCAATTTCAATGTCTTCAATATTGCTGTTGAAATTGTCAGTGCATATCGGAATGTAGGACTTACTATGGGATACAGTTGTGAACGACAATTGCATCCAGAGGCAAATTGTGAAAACATGTGGATTGGATTTGTTGGAAAATGGAGTGACGAGGGTAAGATCATTCTTATACTTGTTATGTTATTAGGAAGGCTCAAGAAATTCAATATTGATGGAGGCAATCCATGGAAACTTCTCTGA 1611 0.3426 MEILGCFIQKLQLLCNTSCRKLACLTKSIFFLTSYFYRFILLRANPLWVQIVYFISISIFGFGFLKALNPPLDHTTKNLDLFFTSVSATTVSSMSTVEMETFSNPQLIIITILMFIGGEVFTSMVGLHFVRSRLKTSLDKIDTSHGRLASTNSTILDLELEMVSNEVHNKSHEPFNTNTTTSENLRYSSMKYLVYVILGYIVILHIIGLFGISIYLAMIPSAKQVLRNKGLNMSTFSVFTIVSTFSNCGFVPTNENMIVFRRNSGLLLILIPQILLGNTIYPPCLRFCIWVLGKFYKKKECNYLLKNSEEVGYKHLLQGRHSVFLVATVFGFVVIQVTLFSVMDWDSEGLKGLNYYEKMIGVLFQSVNSRHAGESIMDLSILSQAILVLFVFMMYLPPYTSFLPLKDNNGKTSQSSDRMKKRRGKVTEILILSRLSILVIFIILVCITERQQLKDDPLNFNVFNIAVEIVSAYRNVGLTMGYSCERQLHPEANCENMWIGFVGKWSDEGKIILILVMLLGRLKKFNIDGGNPWKLL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03597 536 PANTHER SODIUM TRANSPORTER HKT1 37 535 - -
Tsu03g03597 536 Pfam Cation transport protein 184 491 IPR003445 GO:0006812|GO:0008324|GO:0055085
Tsu03g03597 536 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 37 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03597 Tsu-Chr3 49295412 49300359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03597 66 535 Inorganic Solute Cotransporters AT4G10310 46.947 4.86e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03597 K24976 - vvi:100242150 582.408