Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03586 ATGAAGGACTCGGCAGCAGCGAAATGGAAACAAATTGAGATTTCAGAGAGcTACCTTGTTTGTTCCATGTATGAAGAAGCTGCGTCATTGGCTTCTACTATTTTGAAACAACGCTCTTTgcacgatgatgatgatgatatggtTGAATCGAGTGCTATGGTTCTCCTTCAAGCATTCAACCAACTCGGCAGAACATCAGAAATTGTTAATCAACTCGGATCCTATTTCATTTCCCCAAAAGCAATTCCTCCCCAACTTCTACTTACCGGAGTTTGTTTTCAATTAGCACAAGGTTCTACTTTCGGTGTTCGTGAATTTCTTGAAGAATTTCTTAATGGATGGACTCTTAGTGATGGACAATATCATTATCATGCTGTCATTACAGAACCAAATGTAGATTGTGGAAGTAGTTTTGAGAACCACCTTGTTCTTGGTATTGATGACTATTTGGAAGTTGTTGAGGTATACGCCGTTACACTTGTTGCAACGGTTCTACAAGATGTTGATCTTGCAATTTCATGGGTTCAAAATGCTGAATTGCCTAAGGAAAATCGACAGGGACTTCTGAGGAGGTTACACTCTATGCATTCTCTTAAAACTACCATTTCGTCTCAAGTTGTCTCTCTGCGATCGCATACAAATAATAATGAAGGATCGTCTGAGGCCTTGAAAGGCAAACATGCTGACGATAAAACTTATAGGTCCAAAGATGGTGTTTCAAAACTGTCTGAACGGATAGCGACGTGTTTCTGGTGTTTCCGTTCTATTAATTTGAAGGTTGGTAATGCTAAGTTTGTCATACCTAGCGGGAAGATTATGCTCGGTTGTTTGATCTTGTTCGTCTGTTATGTTTTCAGAAGAAAGCATGCTACTTTGAAAAGGATTGTAAGAAGACAAGTGATCGCGACAAAGAGGGCTTTGGGCGATTTGTGGCAGCTTGCATTTTCTTATGAGGTTGATCCATTGGCAGCTGTTCAACCACTTGCTGCTGCAGCATATCGAGACATAGATTCTCTCCTCAAATTGAAAAACTCTTTTCAAAACACCGACGTTGTATTATCTTCATGGAACTCATCTGCCCCTCCATGTACAGGTGATGATGCAAATTGGTCCGGCGTTCTCTGCTACAAAGGACATGTTTGGGGATTCAAACTCGAAAACATGAACCTTAAAGGCACCATTGACGTTGATTCCATCAAGGATTTGCCTTATATCAGAACCCTTAGCCTCATGAACAACCAATTTGATACCCCGTGGCCGGACCTCAACAAACTCTCTGGTCTCAAGACCCTCTACCTATCGAATAATAAATTTTCCGGCGAGATTCCGGCTGACGCGTTTCATGGGATGCAGTGGTTGAAGAAAATTCATCTGTCTAACAACCAGTTCACTGGTCCTATTCCAACTTCCCTTTCTTCACTGCCGAGGTTGATATCGTTGAGGCTGGATGGAAACAGATTCAGTGGTCATATTCCTGAATTTCGCAAACCGTTGAAATCATTCAGTGCAGCAAATAATCAATTAGAGGGTGAAATACCTGCCTCCCTTAGCCACATTCCAGCTTCATCTTTTTCTGGTAATCAAAAGCTGTGTGGAGCCCCTTTAGGAGCATGCGCGCCGGAAAAGAAATCATTATCAATAAATGCGAGCCGTATTGTGGTTGTGGTTCTTGTTAGTCTTGCAATGTTTGTGATTGCAGCAGTAATATTATTTGTCCttattagaagaagaaaaaaagctGAACAACAAGAATCAGGACGAGTAGTAGTTGGCGTAGTTGCCAACACCAGCAGCAGGGATAGTACTGTTCAAAAGAAAGGATCATCGTCATCACCAAATGATATTTCAGATGATCAAGGTTCAATAAGATCACGCGGAACCAGCACCGGTACCAGAAGCATGAGGTTATCCTTTGTGAGGGAAGAAGTATCAGAACAATTTGATTTGCAAGATCTGTTGAGAGCCTCTGCTGAGATATTAGGAAGTGGTTGTTACAGTTCATCCTATAAGGCTGCTCTGTTGACTGGCCCCACTGTTGTCGTCAAAAGATTCAAACAGATGAACAATGTTGACAGGCAAGAGTTTCGGGAACACATGCGAAGACTAGGAAGGTTGAATCATCCTAATCTCCTTCCTCTCCTGGCTTACTACTACAAAAGAGATGAGAAACTCTTCATTACCGACTATGTTCGCAATGGCAGTTTGGCCATTCGCCTTCACGGATACCAAGCGATAGGAAAGGAAAGCCTTGATTGGCCGACGAGGTTGAAGATTGTGAAAGGTGTAGCAAAAGGTATTGAATATCTGTACAAAGAGATGCCGAACCTGATTGCGCCTCACGGTCATCTTAAATCCTCAAATGTTCTTCTGAGTGAGTCTTTGGAGCCTATACTAACTGACTATGGATTAGTACCTGTGATAAACCAGGATATTGCTCCAGAAATAATGGTTATATACAAGTCACCTGAGTATTTGCAACAAGGGAGGGTCACTAAGAAGACTGATGTGTGGAGTTTTGGGATACTCATTTTGGAAATTGTAACCGGAAAGTTTCCTGCTAATTTTATACAAGGGAGTGAATTGAGTTTGGCGAATTGGTTGGAATCTATTGCGCCGGAAGCATGGAGTAATGAGGTGTTTGATAAAGATATGGCGTTAACTAGTAACAGTGAGGGAGAGATGATTAAGCTTTCGAAGATTGCATTGGGTTGTTGTGATATGGATGTTGATAAGAGATTGGATTTGAAAGAAGCAGTTTCAAGAATTCAAGAGGTACAAGAAGATACCATTAATGAAGATGATATGTATTCTTCTTCTTAA 2820 0.4078 MKDSAAAKWKQIEISESYLVCSMYEEAASLASTILKQRSLHDDDDDMVESSAMVLLQAFNQLGRTSEIVNQLGSYFISPKAIPPQLLLTGVCFQLAQGSTFGVREFLEEFLNGWTLSDGQYHYHAVITEPNVDCGSSFENHLVLGIDDYLEVVEVYAVTLVATVLQDVDLAISWVQNAELPKENRQGLLRRLHSMHSLKTTISSQVVSLRSHTNNNEGSSEALKGKHADDKTYRSKDGVSKLSERIATCFWCFRSINLKVGNAKFVIPSGKIMLGCLILFVCYVFRRKHATLKRIVRRQVIATKRALGDLWQLAFSYEVDPLAAVQPLAAAAYRDIDSLLKLKNSFQNTDVVLSSWNSSAPPCTGDDANWSGVLCYKGHVWGFKLENMNLKGTIDVDSIKDLPYIRTLSLMNNQFDTPWPDLNKLSGLKTLYLSNNKFSGEIPADAFHGMQWLKKIHLSNNQFTGPIPTSLSSLPRLISLRLDGNRFSGHIPEFRKPLKSFSAANNQLEGEIPASLSHIPASSFSGNQKLCGAPLGACAPEKKSLSINASRIVVVVLVSLAMFVIAAVILFVLIRRRKKAEQQESGRVVVGVVANTSSRDSTVQKKGSSSSPNDISDDQGSIRSRGTSTGTRSMRLSFVREEVSEQFDLQDLLRASAEILGSGCYSSSYKAALLTGPTVVVKRFKQMNNVDRQEFREHMRRLGRLNHPNLLPLLAYYYKRDEKLFITDYVRNGSLAIRLHGYQAIGKESLDWPTRLKIVKGVAKGIEYLYKEMPNLIAPHGHLKSSNVLLSESLEPILTDYGLVPVINQDIAPEIMVIYKSPEYLQQGRVTKKTDVWSFGILILEIVTGKFPANFIQGSELSLANWLESIAPEAWSNEVFDKDMALTSNSEGEMIKLSKIALGCCDMDVDKRLDLKEAVSRIQEVQEDTINEDDMYSSS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03586 939 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 331 929 - -
Tsu03g03586 939 SUPERFAMILY L domain-like 334 535 - -
Tsu03g03586 939 SUPERFAMILY Protein kinase-like (PK-like) 658 925 IPR011009 -
Tsu03g03586 939 Pfam Leucine rich repeat 427 487 IPR001611 GO:0005515
Tsu03g03586 939 PANTHER LRR RECEPTOR-LIKE KINASE 331 929 - -
Tsu03g03586 939 MobiDBLite consensus disorder prediction 212 233 - -
Tsu03g03586 939 Gene3D Ribonuclease Inhibitor 498 538 IPR032675 -
Tsu03g03586 939 MobiDBLite consensus disorder prediction 600 629 - -
Tsu03g03586 939 Pfam Protein kinase domain 657 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03586 939 Gene3D Ribonuclease Inhibitor 333 496 IPR032675 -
Tsu03g03586 939 Gene3D Phosphorylase Kinase; domain 1 622 729 - -
Tsu03g03586 939 Pfam Leucine rich repeat N-terminal domain 334 375 IPR013210 -
Tsu03g03586 939 Gene3D Transferase(Phosphotransferase) domain 1 730 938 - -
Tsu03g03586 939 ProSiteProfiles Protein kinase domain profile. 654 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03586 Tsu-Chr3 49135674 49142551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03586 335 938 Receptor kinase-like Gene Family AT5G35390 50.081 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu03g03586 Pkinase 3.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03586 - - ccaj:109803310 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03586 03 49135674 49142551 Tsu03g03586 03 49135674 49142551 ECH