Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03582 ATGTCTCGTATGAATGCAGATAAGAAGCTTGGTGCAGGGCGTGTGGTGGCCGTGGCAATCGAGAATAATAAAACAAGCCAACAAGCAGCAAAATGGGCCGTCGAAAATCTTCTTCCCAAAGATCAATGCCTCTTTCTCATCCATGTTAAACAAACAACCAATGGAGATATGAATGGAGATGCCATGGATAGTGAATCTAAAGATCTTTTTGATTCATTTCGTGTTTTCTGCAATAGAAAAAATATACAATGCAAAGAAATATTGTTGGAGGAAACAGATATATCAAAGGCATTGATAGATTGCATTTCAGTTCATGCTATCGAGCTTCTTGTATTAGGGGCATCATCAAAGGGTGGTCTTGTTAGAAGATTTAGGACAACGGATGTTCCAACCACAGTTTCAAAAGCAGCACCACCATTCTGCACAGTATATATAATATCTAAAGGCAAAATCTCAAGTGTGAGATCTGCAACATCTCCAATTCCAAAACCAATATCAGCAATTGTAGCACCACCAACACCAACACGTAGTCACCAATTCCAACAGCCACATGCAATGTCAACTCGAAGTGCCGAAAGACCAGACCCCCAAATGACACGCAGCTACCCACCACGACCTTTATCGGAGAGGAATACAACATATGGCATGATCCATGGTCTGGATGATGAACAAGAAATGATATCACCATTCAACAGGAGAGGACATAAAGCATACGAGTCATCACTTCATGATTCAGATATATCATTTGTGAGCAGTGGAAGACCGAGTATTGATCGAATATTCCCTTCATTGTATAACATTGATGATCTAGACACTACTAGTATTAGTAGTGGAATTCCCAACATTAGGCTTTCGGGTGGCTCTGATTTTGATGCAATAAGCAGCTTTGCTTCATCCTCTTCTGGGGGAGGAGGAGGTGGAGGACAAAACTCAATTGACTTGTCCTCTCCTATGGATAACTATTCATTCGGCTCCCAAAACAGTTCTGGTCCTAATTCCTCCTCATCAAGGTTATCTGACTCCACCGATGAAGTCGAAGCAGAGATGAGGAGGCTCAAGCTTGAACTCAAACAGACAATGGAAATGTACAGTTCAGCTTGCAAAGAAGCACTCACGGCAAAGCAGAAGGCGATGGAACTTCAACGTTGGAAATccgaagaagaaaagaaattggAAGAGGCAAGAGAAGGTGAAGGAGCAGCTATGGCTATGGTAGAGTTGGAGCAAGAAAAATATAAAGCTGCACTCAAAGCAGCTGAAGCATCTCAAAGAATTGCAACATTGGAAGCACAAAAACGAATGAAGGTAGAGAGAAAAGGAGAAATAGAAGCAAGTCAGAGGAAGAAGGTAGAAGATTCTTATAGTCCAGCACATTACACCAGTGCCAGATATAGACGATACAGTATTGAGGAAATTGAAGAGGCAACAAATCAATTTTCAGATAGTCTCAAAATTGGTGAAGGAGGGTATGGTCCTGTTTATAGATGTGAACTTGATCATACACAGGTTGCTATCAAAGTGTTGAAATCAGATGCAGCTCAAGGAAGGGCGCAATTTAACCAGGAAATTGAAGTGTTGAGTTCTATAAGACATCCAAACATGGTGCTTCTGTTAGGAGCATGTCCTGAATATGGTTGCATAGTGTATGAGTACATGGGTAATGGAAGTTTGGAGGATTGTTTGTTCagaaaagataagagaccaccTCTTCCTTGGCAGTTGAGATTTCAAATTGCTGCTGAGATAGCTACTGGACTCCTTTTTCTTCACCAAAATAAACCGGAACCGATTGTGCACCGTGACTTAAAACCTGGAAACATTTTACTTGACCGGAACTATGTGAGCAAGATTGGTGATGTTGGCTTGGCAAGGCTTGTTCCTCCTTCTGTTCAAGACACTGTCACACAGTATCGCATGACGTCAACTGCTGGAACGTTTTGTTACATTGACCCTGAGTACCAACAAACCGGCATGCTAGGCATCAAATCTGATATTTACTCACTTGGAATAATGCTTTTGCAAGTTGTTACCGCCAAGCCTCCGATGGGTTTGACGCATCACGTTGGTAGATCTATTGACAAGGGAACTTTTCCTGACATGCTTGATCCTGCTGTTCAAGACTGGCCTATTGAACATGCCTTGCATTTCACCAAACTTGCCCTTCAGTGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTTGTACTTCCTGAGCTCAACAAACTCAGAATATTCGCCGAAGAAAACATGCCTATGATGATGTTTAGAGGAGCATTCAATCCCAGAGGTAGCAGCAACTATTTCATCAACTCCACATCTTCTACCCATGAAGACATTGTGAGTGAATCCAATTCTTTGTCTGGCATCTCCGGATATGAAAGCCGTTCAAGCGCATCATCACTGGGGTGA 2418 0.414 MSRMNADKKLGAGRVVAVAIENNKTSQQAAKWAVENLLPKDQCLFLIHVKQTTNGDMNGDAMDSESKDLFDSFRVFCNRKNIQCKEILLEETDISKALIDCISVHAIELLVLGASSKGGLVRRFRTTDVPTTVSKAAPPFCTVYIISKGKISSVRSATSPIPKPISAIVAPPTPTRSHQFQQPHAMSTRSAERPDPQMTRSYPPRPLSERNTTYGMIHGLDDEQEMISPFNRRGHKAYESSLHDSDISFVSSGRPSIDRIFPSLYNIDDLDTTSISSGIPNIRLSGGSDFDAISSFASSSSGGGGGGGQNSIDLSSPMDNYSFGSQNSSGPNSSSSRLSDSTDEVEAEMRRLKLELKQTMEMYSSACKEALTAKQKAMELQRWKSEEEKKLEEAREGEGAAMAMVELEQEKYKAALKAAEASQRIATLEAQKRMKVERKGEIEASQRKKVEDSYSPAHYTSARYRRYSIEEIEEATNQFSDSLKIGEGGYGPVYRCELDHTQVAIKVLKSDAAQGRAQFNQEIEVLSSIRHPNMVLLLGACPEYGCIVYEYMGNGSLEDCLFRKDKRPPLPWQLRFQIAAEIATGLLFLHQNKPEPIVHRDLKPGNILLDRNYVSKIGDVGLARLVPPSVQDTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQVVTAKPPMGLTHHVGRSIDKGTFPDMLDPAVQDWPIEHALHFTKLALQCAEMRRKDRPDLGKVVLPELNKLRIFAEENMPMMMFRGAFNPRGSSNYFINSTSSTHEDIVSESNSLSGISGYESRSSASSLG 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03582 805 SMART serkin_6 479 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03582 805 Gene3D Phosphorylase Kinase; domain 1 448 551 - -
Tsu03g03582 805 Pfam Universal stress protein family 14 137 IPR006016 -
Tsu03g03582 805 ProSiteProfiles Protein kinase domain profile. 479 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03582 805 Coils Coil 342 362 - -
Tsu03g03582 805 Gene3D HUPs 14 146 IPR014729 -
Tsu03g03582 805 Gene3D Transferase(Phosphotransferase) domain 1 552 754 - -
Tsu03g03582 805 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 135 - -
Tsu03g03582 805 Pfam Protein kinase domain 482 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03582 805 CDD STK_N 15 149 - -
Tsu03g03582 805 Coils Coil 402 438 - -
Tsu03g03582 805 MobiDBLite consensus disorder prediction 169 212 - -
Tsu03g03582 805 MobiDBLite consensus disorder prediction 298 340 - -
Tsu03g03582 805 MobiDBLite consensus disorder prediction 172 195 - -
Tsu03g03582 805 MobiDBLite consensus disorder prediction 298 346 - -
Tsu03g03582 805 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 805 - -
Tsu03g03582 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Tsu03g03582 805 SUPERFAMILY Protein kinase-like (PK-like) 455 738 IPR011009 -
Tsu03g03582 805 PANTHER OS02G0152300 PROTEIN 1 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03582 Tsu-Chr3 49114644 49117867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03582 6 760 Receptor kinase-like Gene Family AT1G78940 53.437 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tsu03g03582 Pkinase 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03582 - - cam:101511100 1206.43