Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03578 ATGGTTGTTTTTAGACAAAATTCAGGACTTCTTCTTATGCTTATTCCACAAATACTTGTCGGGAACACATTGTACCCTGCATGCTTGAGATTTTGCATATTGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAATTATGTTTTGAAGCATTCGGAGGAAGTTGGTTACAAACACTTGTTAGAGGGGAAACAAACTGTTTTTCTTGTGGCTACTGGTTTTGGGTTGATTGTGGTACAAGTTACATTGTTTTGTGTAATGGATTGGAATTCAGAAGGATTGAAGGGGTTGGATTTTTATCAGAAATTGATTGCTGTGTTATTCCAATGCTTTAATTCAAGACATGCAGGATCAAGTGTTGTGGATATCTCAATCATATCAGAAGCCATTGCTTATGGGAACGTAGGATTTAGTACAGGATACAGTTGTGAAAGAAAGTTGCATCCAGATGCAAATTGTGAAAACAAGTGGATTGGATTTGCTGGAAAATGGAGTAATGAGGGTAAAGTCATTCTCATACTTGTTATGTTGTTTGGAAGGCTCAAAAAATTCAATATGGATGGAGGCAAGCCATGGAAACTTCTCTGA 588 0.3656 MVVFRQNSGLLLMLIPQILVGNTLYPACLRFCILVLGKFYKKKECNYVLKHSEEVGYKHLLEGKQTVFLVATGFGLIVVQVTLFCVMDWNSEGLKGLDFYQKLIAVLFQCFNSRHAGSSVVDISIISEAIAYGNVGFSTGYSCERKLHPDANCENKWIGFAGKWSNEGKVILILVMLFGRLKKFNMDGGKPWKLL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03578 195 Pfam Cation transport protein 1 130 IPR003445 GO:0006812|GO:0008324|GO:0055085
Tsu03g03578 195 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 1 130 - -
Tsu03g03578 195 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 131 194 - -
Tsu03g03578 195 PANTHER SODIUM TRANSPORTER HKT1 1 130 - -
Tsu03g03578 195 PANTHER SODIUM TRANSPORTER HKT1 131 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03578 Tsu-Chr3 49084865 49087491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03578 131 194 Inorganic Solute Cotransporters AT4G10310 53.846 9.09e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03578 K24976 - cpap:110809819 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03578 03 49084865 49087491 Tsu03g03578 03 49084865 49087491 ECH