Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03576 ATGAATATTTTCTATTGTTTTGGCAAAAAGTTGCAACACCTTTGTAACACATCATGCCAAAAACTTACTTATCttatcaaatcaatttttttcttagtACCATGTTTTTGTCGTTTCATTCTCCTAAGAGCAAATCCATTATGGGTTCAAATTGTATATTTCATTTCTATTTCCATTTTGGGTTTTGGATTTCTCAAAGTTATAAAGCCATTAAATCAAACAACACCTAAAAACTTAGATTTGTTCTTCACATCAGTTTCAGCCACCACAGTTTCAAGCATGTCCACAGTTGAAATGGAAACTTTTTCTAATCCTCAACTAATCATCATTACCATCTTAATGTTCATTGGTAGTGAAATCTTCACATCAATGGTAGGACTTCATTTCATTAGATCAAGGCTCAAAACCGATCTCGATAAAATCGCTTCTTCTCATGCGCGTCTTGCTTCTCTAAACCCTTTCATTGTTGATCAAATTCatcttgaaattcaaatggtcACAAATGAGGTACACAATAAATCACATGAATCCTTACATAGTATATCACATGAATCTTTGCACAATAAATCACACCAATCTTTGCACAATATTTCACATGAATCATTGAGTACTACAAATGAAAATTTAAGGTACTTGTCTATGAAATATTTGGGTTATGTAGTTCTTGGTTACATTGTAATTCTACATATTACCGGTGTATTTGGGGTTACTATTTACCTTGAAATGATTCCTAGTGccaaaaaagtattaaaaaacaAGGGTCTAAACATAACCACATTCTCTATTTTTACAATAGTTTCAACTTTTGCAAATTGTggttttgttccaacaaatgaAAACATGGTTGTTTTTAGACAAAATTCAGGACTTCTACTTATGCTTATTCCACAAGTACTTCTTGGGAACACATTGTACCCTGCATGTTTAAGATTTTTCATATGGGTTTTGGGAAAATTTTACAAGAAGAAAGAGTGTAATTATCTATTGAAACATACAGAAGAGGTTGGTTACAAACATTTGTTAAAGGGGAAACACTCTGTTTTTCTTGTGGCTACTGTTTTTGGGTTGATTGTGGTACAAGTTACATTGTTTTGTGTAATGGATTGGGATTCAGAAGGTTTGAAGGGTATGAATAATTATCAGAAATTGATTGGTGTGTTGTTTCAAAGTGTGAATTCAAGACATACTGGAGAAAGTATTTTGGATATCTCAATTCTATCACAAGCCATGTTGGTATTGTTTGTCCTCATGATGTATCTTCCTCCTTACACCTCATTCCTCCCATTGAAAGATGATAGTAAAAATTCAAGCAGTAAAAGGATGAAAAAGAGAAGAGGAAAGGTCACAGAGAATTTGATATTATCTCAACTCTCCTATTTAGTGATATTCATAATACTAGTGTGCATAACTGAGAAGAAAAATTTGAAGGAAGATCCTCTCAATTTCAATGTTCTCAATATTGTTGTTGAAGTTATCAGTGCGTATGGGAGCGTAGGATTTAGTACAGGATACAGTTGTGAAAGACAATTGCATCCAGATGCAAATTGTGAAAACAAGTGGTTTGGATTTGCTGGAAAATGGAGTAATGAGGTACTCATGAACTATGACAAAGTTGGACCGATTATCTCGGGTCGTGGGTTACGACAAGGAAACCCTCTTTCTCCTTACTTATTTATTCTGGTCGCAGAGGGTTTGACTTCTCTTATTCATCAGGCAGTTGGGAGGGGTGATGTTCATGGAGCGAGGATTTGTCGTGGGGCCCCTGAGGTGTCTCACCTTCTGTTTGcggatgattgtttcttgttttgCAGGGCAAGTGCCGGAGAGGTAAATCACCTTATGAACATTCTACATACTTATGAACTAGCCTCTGGTCAGGAAATAAATTTGGCCATGTCCGAAGTATTTTTTAGTCGCAATTTGTCTCATGCAACTAAAGAAAACCTGGTTAGTATTCTTGGAGTCCGCCATGTTTTAGGAACAGGCATATATCTTGGTCTGCCGTCTATGATAGGAAGGAGTAAGAAAGCGATATTTTCTTACATTAAGTACCGtatttggaagaaaatgaatTCTTGGAGAGGGCGAGCTTTGTCTAAGGCTGAAAAGGAGGTTATGATAAAATATGTGCTTCAAGCCATCCCATCATATGTGATGAGTATGTTTATCCTTCCCTCCTCactcattgatgatattgagaaaatgttaaatGCGTTTTGGTGGGGAGACGGAAGTAATAACAATAAAGGGATTCACTGGTTAGCTTGGGATAGGCTTGCATGCCCTAAAGCGAAGGGTGGTTtgggctttcgtaattttgaagcgtTCAATATGGCTATGGTGGTGAAACAAGCATGGAACATCATTCAAAATCCAGAGTTATTGGCGGCTAAAATAATTAAAGCAAGATATTTCCCACGTTCTTCGTTACTTGAAGCATCTTTAGGTTATAATCCTAGCTTTGCTTGGCGTAGTATTTGGAAGGTTAAACAAATTCTCTTACATGggtgtaggtggcggattggtaGTGGTGAAAGGATCCGTGTTATGTATGATCCATGGCTGAGAGGGAATGGTGATCGTTGGGTGTCCTCACCTCAAGTAGAATGTGTAtatgatttatttgttaaagaATTGCTCATTGAGAATTATAAAGCATGGGATATAGCTAAGATTCGTAATTTGTTTATAGGACCAGTGGTGAAAGACATTATTGCAACTCCTCTTATTAGTTCGGTTAAAGAGGACAAAGTGGTTTAG 2760 0.3391 MNIFYCFGKKLQHLCNTSCQKLTYLIKSIFFLVPCFCRFILLRANPLWVQIVYFISISILGFGFLKVIKPLNQTTPKNLDLFFTSVSATTVSSMSTVEMETFSNPQLIIITILMFIGSEIFTSMVGLHFIRSRLKTDLDKIASSHARLASLNPFIVDQIHLEIQMVTNEVHNKSHESLHSISHESLHNKSHQSLHNISHESLSTTNENLRYLSMKYLGYVVLGYIVILHITGVFGVTIYLEMIPSAKKVLKNKGLNITTFSIFTIVSTFANCGFVPTNENMVVFRQNSGLLLMLIPQVLLGNTLYPACLRFFIWVLGKFYKKKECNYLLKHTEEVGYKHLLKGKHSVFLVATVFGLIVVQVTLFCVMDWDSEGLKGMNNYQKLIGVLFQSVNSRHTGESILDISILSQAMLVLFVLMMYLPPYTSFLPLKDDSKNSSSKRMKKRRGKVTENLILSQLSYLVIFIILVCITEKKNLKEDPLNFNVLNIVVEVISAYGSVGFSTGYSCERQLHPDANCENKWFGFAGKWSNEVLMNYDKVGPIISGRGLRQGNPLSPYLFILVAEGLTSLIHQAVGRGDVHGARICRGAPEVSHLLFADDCFLFCRASAGEVNHLMNILHTYELASGQEINLAMSEVFFSRNLSHATKENLVSILGVRHVLGTGIYLGLPSMIGRSKKAIFSYIKYRIWKKMNSWRGRALSKAEKEVMIKYVLQAIPSYVMSMFILPSSLIDDIEKMLNAFWWGDGSNNNKGIHWLAWDRLACPKAKGGLGFRNFEAFNMAMVVKQAWNIIQNPELLAAKIIKARYFPRSSLLEASLGYNPSFAWRSIWKVKQILLHGCRWRIGSGERIRVMYDPWLRGNGDRWVSSPQVECVYDLFVKELLIENYKAWDIAKIRNLFIGPVVKDIIATPLISSVKEDKVV 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03576 919 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 18 530 - -
Tsu03g03576 919 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 533 655 IPR000477 -
Tsu03g03576 919 PANTHER SODIUM TRANSPORTER HKT1 18 530 - -
Tsu03g03576 919 Pfam Cation transport protein 206 510 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03576 Tsu-Chr3 48976323 48983228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03576 66 528 Inorganic Solute Cotransporters AT4G10310 47.059 1.18e-132 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03576 K24976 - fve:101299485 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03576 03 48976323 48983228 Tsu03g03576 03 48976323 48983228 ECH