Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03544 ATGGGTCGGCGTAGAAACAAGAATCAAACCAACcaacaacaagaagaagaacagAGCAACAATCACACAAACAACAacatgaacaacaacaacaacaatcaccTTCGATTCCAGGATGCTGACGAAGTAATTGAGGATGCTGGTGAAACATCAAACCTCGACCAATCAATGGGTGGTTGTGAACTCGATGATTCCAATGACAAAACTAGTGCTGATTACTACTTTGATTCTTACTCTCACTTTGGAATTCATGAAGAAATGTTGAAGGACACCGTAAGAACCAAAACATATCAAAATGTTATTTATCAGAATAAGTTTTTATTCAAGGATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGGATTTTATCACTGTTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCCGTTGAGTGCTCTCAAATGGCTGACAGGGCAAAGGAAATAGTTGAAGCAAATGGTTACTCTAAGGTTATAACAGTTTTGAAAGGGAagattgaagaacttgaacttCCAGTTCCTAAGGTTGACATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGTGGATGATGGAGTTATTTTACCGGATATTGCATCGCTCCATATTACGGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAATAATGTCTATGGATTTGACATGAGCTGCATCAAGAAGCAAGCGTTGATGGAGCCTCTTGTCGACACAGTAGACCAGAATCAGATTGCAACGAACTCTCAGCTACTCAAGACCATGGACATCTCAAAAATGTCCCCAGGAGATTGTTCATTCACAGCACCTTTTAAGCTTGTAGCTGTTCGTGATGATTTTATTCATGCTCTTGTGGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAAATCGAGGAATACGCATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTAGGGAGCATGACTGTGGCCCCAAATAAAAAGAATCCTCGTGATGTTGATATAATGCTCAAGTATACATTGAATGGAAGGCGATGCAGTGCTTCGAGGGTTCAGTATTACAAGATGCGTTAG 1179 0.3783 MGRRRNKNQTNQQQEEEQSNNHTNNNMNNNNNNHLRFQDADEVIEDAGETSNLDQSMGGCELDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADRAKEIVEANGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDDGVILPDIASLHITAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNSQLLKTMDISKMSPGDCSFTAPFKLVAVRDDFIHALVAYFDVSFTKCHKLMGFSTGPKSRNTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYTLNGRRCSASRVQYYKMR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03544 392 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 36 392 - -
Tsu03g03544 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 391 IPR029063 -
Tsu03g03544 392 CDD AdoMet_MTases 113 213 - -
Tsu03g03544 392 Pfam Methyltransferase domain 113 185 IPR041698 -
Tsu03g03544 392 Gene3D - 217 392 - -
Tsu03g03544 392 Gene3D Vaccinia Virus protein VP39 62 214 IPR029063 -
Tsu03g03544 392 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 71 372 IPR025799 GO:0016274|GO:0018216
Tsu03g03544 392 MobiDBLite consensus disorder prediction 1 34 - -
Tsu03g03544 392 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 36 392 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03544 Tsu-Chr3 48682170 48685575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03544 30 354 C2H2 Transcription Factor Family AT3G12270 37.464 5.59e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03544 K11434 - gmx:100781777 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03544 03 48682170 48685575 Tsu03g03544 03 48682170 48685575 ECH