Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03529 atggccAATTCAATTGGACTCATTCTGTTTCTAGTTTTCTGTTTTGGTGTTAAAGTTTTAGTTCATGCACAACAACAAACAGGCTTCATAAGCATTGATTGTGGCAGTCCAACGAATTTGGAGTACACAGATGatgtaacaaaaataaaatacagctcagattcatcacacattcaaacAGGACTTAATGGAAACATTTCTTCTGTCTATGCATATCCAAACGATCCAAATTTACCATTACCACTCTCCGATCTCAGAAGTTTTCCTGACGGAAACCGAAACTGTTACGGATTAATCACTGGAAGAAAAAACAGTTTACATTTAATAAGAGCTTCTTTCTTATATGGAAACTATGATGGCGAAAACAAACTACCTGAATTCGATCTCTACGTTGGTGTAAATTTCTGGTCATCAGTGAAATTTAAGAATGCTTCGGAACAAGTTACATTGGAAATAATCAGCAGGGAAGaatcagatgaaacaaatgtttgTCTTGTGAATAAAGGAAATGGAATTCCTTTTATCTCATCATTAGAACTTAGACCAATTAATGGTTCTATTTATAAAACTGAATTTGGTGATTTTGATGCTTCacttttacttttcaaaagattTGATATTGGTTCAATTAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTGAATTCTTCTTCATGGAAATCCATAAGCACTTTTTCAAGAATTGATGTTAATGGTGATGGATATAAAGCACCATTTGAAGTTATTAGTAATGCTGCTACACCAAGGAATGAGAATGATAGTATAGAATTTTCTTGGATTTCGGATGAACCGAATTCGAAATTTTATGTCTATTTGTATTTTGCTGAAGTGGAGAAACTTGAGAAAAATCAACTGAGAAAATTTAATGTTTCTTGGAATGGAACTCCTTTGATTGAATCTTTTGTACCAAGATACTTGCATGCAACTACTGTTATTAATTCTAAGTCGTTGGTCGCAGACGAACATAGAATTTCGATAGATAGAACTGAAGATTCGACGCTTCCACCTATTCTTAATGCAGTGGAGATTTATGTAGTAAGACAACGTGATGCGGTTCCAACATTTGAAGACGATGTTGAAGCTATAACTGTTGTAAAAGAAAGTTATAGAGTTCAAAGAAATTGGGTTGGTGATCCATGTGAACCAAAAAACTACACTTGGGATGGCTTAAAATGCAACTACAGCACTTCACTTCCTCCAAGAATTGTATCATTGAATCTGAGCAGAAGCAGTCTAAGTGGAATAATAACTCCTGCCATTTCCAATTTGACTTTCTTGGAATCTTTGGATTTATGTAACAATAGCTTAACTGGATCAATGCCTCAGTTTTTGGAAGAATTGAAGTCCCTTAAATATTTGAATTTAAGAGGCAATCAGCTTTCAGGTTTTGTCTCTACCAATCTCCTAGAAAGATCAAAAAATGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGGttcaagtaaaaaaaagaaggtcATTGCTCCCATTGTTGCATCAATAACATCAGTTTTAGTTCTATTGGTCATTGCCATTCTCTATTGGAAgcttagaagaagaaatcaaacATCAGAGGAGGAGATGAATATGATCAACAAAGGATCAAGTAATGTAGTATCAAAGAAGTTGCAATACACTTATGCTGAGGTGATGGAAATCACTAGCAACTTTGAATTGGTCATTGGTAAGGGAGGATTTGGAAGTGTGTATTGTGGTCAGATGAAAGACGGCAATAAAGTTGCAGTCAAAATgctttcttcatcttcaactcAGGGTCCAAAGGAATTTCGAACTGAGGCTGAACTATTGATGACAGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGTGACAAGATGGCACTCATATATGAGCACATGGCTAATGGCAACCTAAAAGAATGTCTCTCAGAAAATCATTCACATTGCTTGAGTTGGGAAAGGAGACTTCAAATAGCAATTGATGCTGCAGAAGGATTGGATTACCTACACCATGGATGCAAGCCACCTATAATACATAGAGATGTAAAATCAGCAAACATTCTTCTAAGTGAAGATTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAATCTAAATGCAGAATCTACAATGATTCTTGTTGATGATGGTAATGAAAAATCTGCAATCATGGGAACAATGGGCTACCTTGATCCAGAGTACTACAAATTAAACAACTTGAATGAAAAAAGTGACATATATAGCTATGGAGTTGTACTATTGGAATTAATCACAGGTCATCCTGCAGTGATTAAAGGAAAGCCATCAATACACATACTTGAGTTTGTAAGACCACTACTTGAAAAAGGTGTCTTAAATACAATTATAGATCCAAGACTCAAAGgaaattttgatgaaaattCAGGATGGAAAGTTTTAGGATTAGCAATTTCATGCACTGCATCAACCTCAATTCAAAGACCAACAATGAGTGTTGTGTTAGCTGAGTTGAAACAATGTGTTAATTTGGAGTCTACCAGTGAAAGGGAAATATTTGTGCCACCAAGACATATCTATAGTGAATTTTATAGTTCATCTGATGCATTTAAATCCATAGATAGTGAATCTATGACATATTCTTTCCCAAGGTAA 2694 0.3289 MANSIGLILFLVFCFGVKVLVHAQQQTGFISIDCGSPTNLEYTDDVTKIKYSSDSSHIQTGLNGNISSVYAYPNDPNLPLPLSDLRSFPDGNRNCYGLITGRKNSLHLIRASFLYGNYDGENKLPEFDLYVGVNFWSSVKFKNASEQVTLEIISREESDETNVCLVNKGNGIPFISSLELRPINGSIYKTEFGDFDASLLLFKRFDIGSINGSGRYEDDVYDRIWFPLNSSSWKSISTFSRIDVNGDGYKAPFEVISNAATPRNENDSIEFSWISDEPNSKFYVYLYFAEVEKLEKNQLRKFNVSWNGTPLIESFVPRYLHATTVINSKSLVADEHRISIDRTEDSTLPPILNAVEIYVVRQRDAVPTFEDDVEAITVVKESYRVQRNWVGDPCEPKNYTWDGLKCNYSTSLPPRIVSLNLSRSSLSGIITPAISNLTFLESLDLCNNSLTGSMPQFLEELKSLKYLNLRGNQLSGFVSTNLLERSKNGLLTLRVDDKNLSGSSKKKKVIAPIVASITSVLVLLVIAILYWKLRRRNQTSEEEMNMINKGSSNVVSKKLQYTYAEVMEITSNFELVIGKGGFGSVYCGQMKDGNKVAVKMLSSSSTQGPKEFRTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEHMANGNLKECLSENHSHCLSWERRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNLNAESTMILVDDGNEKSAIMGTMGYLDPEYYKLNNLNEKSDIYSYGVVLLELITGHPAVIKGKPSIHILEFVRPLLEKGVLNTIIDPRLKGNFDENSGWKVLGLAISCTASTSIQRPTMSVVLAELKQCVNLESTSEREIFVPPRHIYSEFYSSSDAFKSIDSESMTYSFPR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03529 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Tsu03g03529 897 Pfam Leucine rich repeat 415 474 IPR001611 GO:0005515
Tsu03g03529 897 SMART serkin_6 571 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03529 897 CDD STKc_IRAK 577 853 - -
Tsu03g03529 897 Pfam Protein tyrosine and serine/threonine kinase 575 847 IPR001245 GO:0004672|GO:0006468
Tsu03g03529 897 Gene3D Phosphorylase Kinase; domain 1 553 646 - -
Tsu03g03529 897 SUPERFAMILY Protein kinase-like (PK-like) 555 851 IPR011009 -
Tsu03g03529 897 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Tsu03g03529 897 PANTHER OS07G0107800 PROTEIN-RELATED 2 864 - -
Tsu03g03529 897 PANTHER BNAC07G41790D PROTEIN 2 864 - -
Tsu03g03529 897 Pfam Malectin-like domain 32 359 IPR024788 -
Tsu03g03529 897 Gene3D Ribonuclease Inhibitor 367 523 IPR032675 -
Tsu03g03529 897 SUPERFAMILY L domain-like 400 503 - -
Tsu03g03529 897 Gene3D Transferase(Phosphotransferase) domain 1 647 867 - -
Tsu03g03529 897 ProSiteProfiles Protein kinase domain profile. 571 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03529 Tsu-Chr3 48471784 48478871 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03529 2 882 Receptor kinase-like Gene Family AT4G29180 48.778 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu03g03529 Malectin_like 7.1e-104 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03529 - - gmx:100793137 1260.74