Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03514 ATGGAGAAGAAACTAGCAGCCGTAACAAATTTAAAGGTGAGCAACTATATACCTAATGACATTGCCTTCTCCATTCTATCAAAATTGCCTCTCAAATCTTTGAAGCGATTTCAATGTGTTCGAAAATCATGGTCTGTCTTATTCGAAAACCATTTCTTCATGAACATGTTCCACATCAATCTATTTTCTAATTCTCATTGCTGTTCTTATTACGATGGAGCATCTCTCTTCCTAAGGGTTTTTGGACACTATCGGTGCAATTTATATTCACTTTCTGGAAACAGATTCGAGAATAAGGTCAACTTAGATTGCTCATATCCATTTGCCAATCATTTTCgtatttttggttttggtaGTATAAATGGCACACTTTGTTTCCATATAGATAATAATTATGGAAAAATTATATTGTGGAACCCAGCTACCCAGGAAATCAATGTCATTCCTCCCAGTCCGGATTATTCAGTTGAGTCGTCTATCCCCGATGTTGCTAAGGATTTTGTTCGTCTTTATGATATGCATTATCTTCATGGATTTGGTTACGATGACCTTATAGATGACTATAAGGTTATTCGTTATGTAAGTGTTTTAGGTGAAAACCCTGATTGCGAAGATTTATCTTTACCCTTGTTGGAAGATATATCTTCACACTCCTTATGGGAGATATATAGCCTAAGAAGCAACTCGTGGAGGAAACTTGATGTTGACATGCCTTATTCTTTGCATTGTATAGAGGGAACCCAAGTCTTCTTGGATGGAGTGTGTCACTGGTTGTGTGAAGAAGATAGCTCCGCTGGACCATGTTTGGTATCATTTTACTTGAGCAATGAAGTGTTCTTCTTAACACCCATACCCTCAAATGatgattattttgtatttgaagcATGGTGGACAAATTTGGTGGTATTAAATGAATCCATTGCATTGATCTCATATTATGTAGATATGACTTTTCACATATCAATTTTGGGTGAATTTGGTATGGGGGAATCCTGGACTAAACTTTTAAGTATTGGACCACTGTCTTGCGTTGAGCGTCCTATCGGAGTGGGAATGAAAGGAGAGATATTCTTCATAAGAAAGGATGAAGAGCTAGTTTGCCTTGATTTAAGCACCCAAATGATTGAGGAGCTTGGTTTCAAAGAAGAGGATTATCGGATAATAATATACAAGGAAAGCAATCTTCCAATCGGAGGAATAAGTAACTAG 1209 0.3606 MEKKLAAVTNLKVSNYIPNDIAFSILSKLPLKSLKRFQCVRKSWSVLFENHFFMNMFHINLFSNSHCCSYYDGASLFLRVFGHYRCNLYSLSGNRFENKVNLDCSYPFANHFRIFGFGSINGTLCFHIDNNYGKIILWNPATQEINVIPPSPDYSVESSIPDVAKDFVRLYDMHYLHGFGYDDLIDDYKVIRYVSVLGENPDCEDLSLPLLEDISSHSLWEIYSLRSNSWRKLDVDMPYSLHCIEGTQVFLDGVCHWLCEEDSSAGPCLVSFYLSNEVFFLTPIPSNDDYFVFEAWWTNLVVLNESIALISYYVDMTFHISILGEFGMGESWTKLLSIGPLSCVERPIGVGMKGEIFFIRKDEELVCLDLSTQMIEELGFKEEDYRIIIYKESNLPIGGISN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03514 402 PANTHER OS09G0372900 PROTEIN-RELATED 12 387 - -
Tsu03g03514 402 SUPERFAMILY F-box domain 16 92 IPR036047 GO:0005515
Tsu03g03514 402 TIGRFAM F_box_assoc_1: F-box protein interaction domain 119 362 IPR017451 -
Tsu03g03514 402 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 12 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03514 Tsu-Chr3 48289534 48290742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03514 221 369 Carbohydrate Esterase AT1G25141 26.923 7.35e-06 45.1