Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03465 ATGGCTCTTAGTATCATCCAAACCAATggctcctcttcttcttcttcagctaTGATGACACCGAAATTGAAGTATGATGTTTTTGTTAGCTTTAGAGGTCAAGACACACGCAACAATTTCGCCAATCATCTTTTTGCCGCCTTTCAAAGAAAAGGCATTTTAGCATTTAAGGATGATACTAAGATTCAGAAAGGGGAATCCATAGCACCTGAACTCCTTCGTGCAATTGAAGGATCTCAGATTTTCATTGTGATATTCTCAAAACACTATGCTTCCTCAACATGGTGCTTGCGCGAATTGGAATCCATCCTTCATTGTAGTCAAGTTTCTGGAAGACGTGTTTTGCCTGTTTTTTATGATGTTGATCCTTCTGATGTGAGACATCAAAAAGGAAGTTATGCTGATGACCTTGCCAACCACGAGAAAAGATTTCAACATGAGATGGTGAAAAAATGGAGGGAAGCTTTAACACAAGTCGCCAATCACTCTGGTTGGGATATGCGTCATAAGCTGCAAAATGTAGAGATTGAAAAGATTGCCGAAGAGATAATCAATATATTGGGTCACAAATTTTCATATCTTCCAAAAGATTTAGTTGGGATGAATTTACCTATAAAAGAAGTAGTAAATCTATTACTTTTAGACTCGGTTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTTGCTACTGCTTTATTTCGTGGAATATCTCATCAATTTGATGCACGTTGTTATATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAGCAAATCCTACAACAAACTCTTGGTGGGGAACCCTTTCAGATATGCAATCTCTATGACACGGCTAACTTGATACAAAGTAGGCTTCGTCACCTACGAGCACTTATAATTCTTGACAATGTTGATAAAGTTGAACAACTCGATAGATTAGCCGTGGAGCGTGAATGGTTAGGTGCGGGGAGTAGAATCATTATAATTTCTAGAGACGAGCATATCTTGAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTCTTGAGTGAGACTAACTCCCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGACCGTATTTTGAGTAGTCATGAAGGGTTGGTCAATGGCATACTACATTATGCCAATGGCTTACCACTAGCAATTAAAATATTGGGTTCATTTTTGTTTGGTCGAGATATATCTGAATGGAGAAGTGCATTATCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTACGATTAAGTTTTGAAGGGTTGGATGAGTTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATTGGCATGAGGAGGATTGGGTCAAAAATATTCTAAATTGTTGTGGATTTCATGCTGATATTGGTTTAGGAGTTCTAATTGATAAATCACTTATAAGCATTTCGGATGAAGATGAAATTGTAATGCATAGTTTGTTAGAAGAGTTGGGAAAAAACATTGTCCAAGAAATTTCAAGAAAAGAATCAGGAAAGTGGACGAGGGTGTGGCTCCAAGAACAACTCCAAAATGTTATGTTAGAGAACGTGGAAAGGAAGGTTGAAGCCATATTACATCGGAAACAACAAATATCGATCATGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCATATTCCACCAAAGCTGGAATATTTCAGGAAACCTCAGCTACCTCTCTAATGAGTTAAGATATATGGAGTGGGTTTCGTATCCTTTCAAGTATTTGCCGCCATGTTTTCATCCCAATCAACTTGTTGAATTGTCGTTGATTAAGAGCAGCATAAAAAAACTATGGAAAGATAAGAAGCATTTGCCGAATTTAAGATGTTTGGTTCTAAATCActcaaaaaatttaagaaagaTGCCAGATTTTGGGGATATTCCAAACCTAGAGGTGCTAGATCTTGAAGGTTGTATAAAGCTTGTGCAAATAGATCCATCTATCGGGGTTCTGAAAAAGTTATACTTCTTGAACTTGGAAGATTGCAAAAATCTAGTAAACATACCAAACAATATATTTGGTCTCACCTCTCTTAAATATCTAAATCTTTCTGGGTGTCCCAAATTGAATAAGAATCCAATTCCAAGGCAATTGAAGAACCTCGATTCAAGTGAAAGTTCATCACATTCCCAATCAAGAACTTTCTCCTTTTATGATTATCATGAAGGCTTAGCTAGTTGTTTGAGTGAAATTGACATCAGTTTCTGTGGTCTAAGCCAACTCCCAGGTGCAATTGGATGTCTACGTCAGCTCGAAAGCTTAAATATAGCGGGGAACAATTTTGTGACACTACCTAACCTGAAGGAGCTTTCCAACCTTGAATATTTAAACTTAAAGCATTGCAAGCTTTTGGAATCATTGCCTCAACTTCCTTTTCCTACTTTTTTTGATCATATGACAAAACATAAGACCACTTTAAAGCGCATGGAAAATTATTATTGGAGGAAAGTAGGACTAATCATTTTCAATTGTCCTAAATTGGGTGAGAGTGAACATTGCGATAGCATTGCGTTTTTATGGATGGCACAATTCATTCAGGCAAGACAGCAGTCCTCCTATGACTTCTGTGATAAGAATAGGATTGATATTGTTATTCCTAGAAGTGAAATACCAATATGGTTCAAGAATCAGAGCGAGGGTGGTTCAATAAGAATAGAACTATCTACCATTATGGACAATAATTGCATTGGCATTTCTTTTTGTGTGGTATTTTCTGTTAAACCTGATCAAACTGAGGCACAGTATtcgaaaataatattacaattTCTGAATAGTGAACGTAATAAATCGTTTTTTTATCATAGCATTCCAACAAATATAGAAAGAGATCTTATTGTGGTGAAGTCAAATCACATGTGCCTATGCTATATCCCTATGAGACCATTCTTTGATAAATTGAAGGAGATAGACCAAACTCACACGCATCGTGATGATATCATTATGAGTGCTTCGTGTTGGAATTACAGAAGTGTTGCTTTGAAGTTTCAGCATTGCGGGTATCGTTTGGTATATGAACATGATTTACAAGACTTCAACTTAACAATGATGCATCCCGGAAATCTGTCAACTCATAAGAGCAAGTTTTTGGCAATTGAATGA 3168 0.3595 MALSIIQTNGSSSSSSAMMTPKLKYDVFVSFRGQDTRNNFANHLFAAFQRKGILAFKDDTKIQKGESIAPELLRAIEGSQIFIVIFSKHYASSTWCLRELESILHCSQVSGRRVLPVFYDVDPSDVRHQKGSYADDLANHEKRFQHEMVKKWREALTQVANHSGWDMRHKLQNVEIEKIAEEIINILGHKFSYLPKDLVGMNLPIKEVVNLLLLDSVDDVRVVGICGMGGIGKTTLATALFRGISHQFDARCYIDDLSKIYRHDGPIGAQKQILQQTLGGEPFQICNLYDTANLIQSRLRHLRALIILDNVDKVEQLDRLAVEREWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLSETNSLQLFCRKAFKLDRILSSHEGLVNGILHYANGLPLAIKILGSFLFGRDISEWRSALSRLRESPNKDVMDVLRLSFEGLDELEKEIFLDIACFFNWHEEDWVKNILNCCGFHADIGLGVLIDKSLISISDEDEIVMHSLLEELGKNIVQEISRKESGKWTRVWLQEQLQNVMLENVERKVEAILHRKQQISIMGETLSKMSHLRLLIFHQSWNISGNLSYLSNELRYMEWVSYPFKYLPPCFHPNQLVELSLIKSSIKKLWKDKKHLPNLRCLVLNHSKNLRKMPDFGDIPNLEVLDLEGCIKLVQIDPSIGVLKKLYFLNLEDCKNLVNIPNNIFGLTSLKYLNLSGCPKLNKNPIPRQLKNLDSSESSSHSQSRTFSFYDYHEGLASCLSEIDISFCGLSQLPGAIGCLRQLESLNIAGNNFVTLPNLKELSNLEYLNLKHCKLLESLPQLPFPTFFDHMTKHKTTLKRMENYYWRKVGLIIFNCPKLGESEHCDSIAFLWMAQFIQARQQSSYDFCDKNRIDIVIPRSEIPIWFKNQSEGGSIRIELSTIMDNNCIGISFCVVFSVKPDQTEAQYSKIILQFLNSERNKSFFYHSIPTNIERDLIVVKSNHMCLCYIPMRPFFDKLKEIDQTHTHRDDIIMSASCWNYRSVALKFQHCGYRLVYEHDLQDFNLTMMHPGNLSTHKSKFLAIE 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03465 1055 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 196 723 - -
Tsu03g03465 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 196 723 IPR044974 GO:0006952
Tsu03g03465 1055 Pfam TIR domain 24 187 IPR000157 GO:0007165
Tsu03g03465 1055 Gene3D Ribonuclease Inhibitor 744 836 IPR032675 -
Tsu03g03465 1055 SUPERFAMILY L domain-like 547 818 - -
Tsu03g03465 1055 Gene3D - 22 188 IPR035897 -
Tsu03g03465 1055 Gene3D - 356 440 IPR042197 -
Tsu03g03465 1055 SUPERFAMILY "Winged helix" DNA-binding domain 427 530 IPR036390 -
Tsu03g03465 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Tsu03g03465 1055 Gene3D Ribonuclease Inhibitor 525 740 IPR032675 -
Tsu03g03465 1055 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 754 1038 - -
Tsu03g03465 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 754 1038 IPR044974 GO:0006952
Tsu03g03465 1055 ProSiteProfiles Leucine-rich repeat profile. 773 794 IPR001611 GO:0005515
Tsu03g03465 1055 SMART till_3 24 162 IPR000157 GO:0007165
Tsu03g03465 1055 Pfam C-JID domain 889 1031 IPR045344 -
Tsu03g03465 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 450 IPR027417 -
Tsu03g03465 1055 Gene3D - 189 351 IPR027417 -
Tsu03g03465 1055 Pfam NB-ARC domain 215 426 IPR002182 GO:0043531
Tsu03g03465 1055 PRINTS Disease resistance protein signature 222 237 - -
Tsu03g03465 1055 PRINTS Disease resistance protein signature 391 405 - -
Tsu03g03465 1055 PRINTS Disease resistance protein signature 298 312 - -
Tsu03g03465 1055 PRINTS Disease resistance protein signature 648 664 - -
Tsu03g03465 1055 ProSiteProfiles TIR domain profile. 23 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03465 Tsu-Chr3 47756940 47761274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03465 25 811 WRKY Transcription Factor Family AT4G12020 30.074 2.96e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03465 - - mtr:MTR_4g080070 1200.27