Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03464 ATGACAAAATCTAAAATGTTcattctaattttgtttttctttttcacctaTGCAAATTCTCAACAATCTCAGTTATACAATGAAGAACATGAAATcctaatgaaaataaaaaagcacTTTCAAAATCCATTATTCCTAAGTCATTGGAATTCATCAAACACTTCATCTCATTGTTCATATCCAGAAATCCATTGCACAAAAGATTCAATCACTTCACTTTTAATGatcaacacaaacataacaCAAACACTTCCACCTTTTCTTTGTGAACTCAAAAACCTCACTTACATTGATTTTCAACTCAATTACTTACCAAATGAGTTTCCAACATCACTTTACAATTGTTCCAAGCTTCAACATCTTGATCTTTCGCAGAACTATTTCGTCGGTAACATACCGAATGACATCGATAGGTTGGCCAATCTGCAGTTTCTTAGCCTCGCCGCAAACAGCTTTTCGGGTGATATTCCAGTGAGTATTGGAAACTTGAAGAATTTAAAAAGACTTGAACTTTATCAGTGTCTTTTTAATGGTACTATTCCTGATGAAATCGGTAACTTGTCGAATCTTGAAACTTTGTATATGTTCTCATATAGTATGCTACCTAGAACAAAGTTACCATCTAGTTTTACAAAGTTGAAGAAATTAAGAGTCTTTTATATGCAAGACTCTAACTTGGTTGGAGAAATTCCTGAAACAATTGGTGAAATGATTGCTTTGGAGGATTTGGATTTATCAGGAAATTCTTTGAGTGGAAAAATTCCAAATGGTTTGTTCACTTTGAAAAATTTGAGCAGACTTCTTCTTTACAATAATAGTCTTTCTGGAGATATACCTGATGTGATTGAAGCGTTCGAGTTAGCAACCTTGGATATTTCGATGAATAATCTCACCGGTAAACTACCGGTtgattttggaaatataaaaaaactaaagtaCTTGGCCTTGTTTACTAATCGATTATCCGGCAAGGTACCTGAAAGCATCGGTAATTTGCCGGCTCTGActgattttattgtttttgaaaacaatttatcAGGTAATCTTCCTCAAGGTTTTGGTAACTTTTCTAAACTTGAAACTTTTCAGATTGCATCTAATAGTTTCAGTGGTAAGCTACCACAGAATTTGTGCTATCATGGAAGGTTAGTTGGTTTAACCGCTTATGACAATAATTTAAGCGGTGAGTTGCCGAAATCTTTAGGTAGTTGTAGCAGCTTGCAGACACtgagtgttgagaataatgagTTTTCTGGTAACATTCCTGATGGTTTATGGACATGTATGAACTTGTCAACAATTAGGATAAGTCAGAACATGTTCACCGGTCAGCTTCCCGAAAGACTGGCTCAGAATCTTTCGGAATTAGCTGTAAGTTACAATCGGTTTTCAGGTAGAATTCCGAATGGAGTTTCTTCTTGGAAGAATGTAGTGAAGTTCAATGCTAGTAACAACTTTTTCAATGGAAGTATTCCGTTGGAGTTAACATCGCTTCCTCGGCTATCAACTCTTCTGCTCGATCAGAACCAACTCACCGGTCGAATTCCATCAGATATCATCTCATGGAAATCCCTACAAAGATTAGACTTGAGCCACAATCAACTCTCTGGAGATATACCGGATTCAATTTGTCGGTTACCTTCTCTAGTTATACTGGACTTATCAGAAAACAAAATCTCCGGCCAAATTCCACCTCAGCTATCTTTGAGACTAACAAATCTCAATCTATCATCAAATTATTTGATAGGGCGGATTCCGAGTGATTTTGAAAGCCTTGCGTATGAAAGCAGCTTTCTGAACAATTCTGGTCTATGTGTTGATATATTGGTACTAAACCTTGCTTTGTGCAATTCTGGAACTACAAGAAGAAGCAGAAGAAGGGACTCATCCATGTCTAAGGCTCTGGTCATAATCTTGGTGGTAGTAGCTTCGTTAACGGTTTTCTTGGCGGTATTCCTGACAATCAGTTTTTACAGAAAAAGAAAGCGATTAATGAAAAGGACATGGAAGCTAACTTCATTTCAGAGGCtaagttttacaaaatcgaACATTGTGTCCTCGATGTCAGAACATAATATCATCGGTAGCGGTGGATTTGGTTCTGTTTATCGCGTCGCTGTTGAAGGTTTAGGCTATGTTGCAGTGAAAAAGATAAGAGGAAATAGCAGAAAGTTGGATCAGAAACTTGTGGATTCATTTCTTGCAGAAGTTGAAATACTTAGCAAAATTCGGCATAACAATATTGTGAAGTTGATGTGTTGTATCTCAAGTGATGATTCGCTACTTCTTGTATACGAGTATCATGAACATCAAAGCCTTGATAGGTGGCTGCACAAGAAAAATAAGTCACCGGCTGTGTCGGGAACTGTGAATGGTAACATCATTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCTGCTCAAGGTTTGTGCTACATGCATAATGATTGCTCGCCGCCTATTGTTCATCGAGATGTGAAAACAAGTAACATTCTTTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATATTGGTCAAGCCGGAAGAACTCGCCACCATGTCGGCTGTGGCTGGAACATTCGGCTATATTGCTCCAGAATATGCTCAAACAATACGAGTCAACGAGAAGATAGATGTCTACAGTTTTGGAGTAGTCCTATTGGAACTGACAACCGGAAAAGAAGCTAATCATGGAGATGAATACTCGTCTCTTGCAGAATGGGCGTGGCGCCATATTCAGATAGGAACCAATATAGAAGAACTTCTTGACGACGATGCTATGGAACCTAGTAACTTGGAAGAAATGTGCAGCATCTTCAAACTCGGAGTTATGTGCACTTCAACATTGCCAGCTAGTAGACCATCAATGAAAGAAGTCTTGAAGGTATTGACCGGCTGCAAGGATCCACTCGCCAACGCGGAGAAGATTGTTGATATTTATGATTCTGCTCCACTTCTTAAGAATTTGAAATGGGAAAAGCAGTTGGAATTTTCAGCATAA 3021 0.3651 MTKSKMFILILFFFFTYANSQQSQLYNEEHEILMKIKKHFQNPLFLSHWNSSNTSSHCSYPEIHCTKDSITSLLMINTNITQTLPPFLCELKNLTYIDFQLNYLPNEFPTSLYNCSKLQHLDLSQNYFVGNIPNDIDRLANLQFLSLAANSFSGDIPVSIGNLKNLKRLELYQCLFNGTIPDEIGNLSNLETLYMFSYSMLPRTKLPSSFTKLKKLRVFYMQDSNLVGEIPETIGEMIALEDLDLSGNSLSGKIPNGLFTLKNLSRLLLYNNSLSGDIPDVIEAFELATLDISMNNLTGKLPVDFGNIKKLKYLALFTNRLSGKVPESIGNLPALTDFIVFENNLSGNLPQGFGNFSKLETFQIASNSFSGKLPQNLCYHGRLVGLTAYDNNLSGELPKSLGSCSSLQTLSVENNEFSGNIPDGLWTCMNLSTIRISQNMFTGQLPERLAQNLSELAVSYNRFSGRIPNGVSSWKNVVKFNASNNFFNGSIPLELTSLPRLSTLLLDQNQLTGRIPSDIISWKSLQRLDLSHNQLSGDIPDSICRLPSLVILDLSENKISGQIPPQLSLRLTNLNLSSNYLIGRIPSDFESLAYESSFLNNSGLCVDILVLNLALCNSGTTRRSRRRDSSMSKALVIILVVVASLTVFLAVFLTISFYRKRKRLMKRTWKLTSFQRLSFTKSNIVSSMSEHNIIGSGGFGSVYRVAVEGLGYVAVKKIRGNSRKLDQKLVDSFLAEVEILSKIRHNNIVKLMCCISSDDSLLLVYEYHEHQSLDRWLHKKNKSPAVSGTVNGNIIDWPKRLHIAIGAAQGLCYMHNDCSPPIVHRDVKTSNILLDSQFNAKVADFGLARILVKPEELATMSAVAGTFGYIAPEYAQTIRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWAWRHIQIGTNIEELLDDDAMEPSNLEEMCSIFKLGVMCTSTLPASRPSMKEVLKVLTGCKDPLANAEKIVDIYDSAPLLKNLKWEKQLEFSA 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03464 1006 Pfam Protein kinase domain 690 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03464 1006 Gene3D Transferase(Phosphotransferase) domain 1 769 988 - -
Tsu03g03464 1006 ProSiteProfiles Protein kinase domain profile. 688 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03464 1006 SMART serkin_6 688 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03464 1006 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Tsu03g03464 1006 SUPERFAMILY Protein kinase-like (PK-like) 679 970 IPR011009 -
Tsu03g03464 1006 Pfam Leucine rich repeat 499 559 IPR001611 GO:0005515
Tsu03g03464 1006 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 998 - -
Tsu03g03464 1006 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 998 - -
Tsu03g03464 1006 ProSiteProfiles Leucine-rich repeat profile. 524 546 IPR001611 GO:0005515
Tsu03g03464 1006 CDD STKc_IRAK 694 972 - -
Tsu03g03464 1006 Pfam Leucine Rich Repeat 570 592 IPR001611 GO:0005515
Tsu03g03464 1006 Pfam Leucine Rich Repeat 240 258 IPR001611 GO:0005515
Tsu03g03464 1006 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515
Tsu03g03464 1006 Gene3D Ribonuclease Inhibitor 339 612 IPR032675 -
Tsu03g03464 1006 SMART LRR_typ_2 237 261 IPR003591 -
Tsu03g03464 1006 SMART LRR_typ_2 546 570 IPR003591 -
Tsu03g03464 1006 SMART LRR_typ_2 139 163 IPR003591 -
Tsu03g03464 1006 SMART LRR_typ_2 498 522 IPR003591 -
Tsu03g03464 1006 SUPERFAMILY RNI-like 286 592 - -
Tsu03g03464 1006 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Tsu03g03464 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Tsu03g03464 1006 Gene3D Ribonuclease Inhibitor 200 338 IPR032675 -
Tsu03g03464 1006 Gene3D Ribonuclease Inhibitor 26 199 IPR032675 -
Tsu03g03464 1006 ProSiteProfiles Leucine-rich repeat profile. 548 570 IPR001611 GO:0005515
Tsu03g03464 1006 PRINTS Leucine-rich repeat signature 546 559 - -
Tsu03g03464 1006 PRINTS Leucine-rich repeat signature 525 538 - -
Tsu03g03464 1006 SUPERFAMILY L domain-like 26 283 - -
Tsu03g03464 1006 Gene3D Phosphorylase Kinase; domain 1 670 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03464 Tsu-Chr3 47751889 47756079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03464 29 996 Receptor kinase-like Gene Family AT5G25930 51.901 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu03g03464 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03464 - - gmx:100785907 1405.19