Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03363 ATGTATAAGCCATTTGTTACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTATAAGAAGGTATAAGTCAAATTCTAACAAAATGAAGGACAAGACAAAGAGTCGAAAGACGGTAGAAAATTTAGAGACAAACAAACAAGACAAAGAAGCGAAAGTGTCGTCAAAAGGTTCGACCGAAAGAGGTTTTGATCCATCTTCTTTGCAGCTTGTGAAGGTGTCTAGAGGGGCCGAGAAGTTGAACAACATGATTGAGTCATGGTCTAGAGGTTTGAGGTATGGTGGAAAATCGGAAGATATCGCGAAGGATTTGTTAAAAGGTGCTCTTGATTTGCAAGAATCTCTTGAGATGCTTCAAAAGGTGCAAGAAGTTTCGAATAACATGGCTCGATCGAAGAAGAAACAAGACGAGGAACGTGAAAGAAGTAGAATTGATGCAAAGATGAATGATGGAATTAGAACAATGCATTCCAATCATTTTGTTGAACACAATTCCGCTTCGGCTTATGGTTCTTCGAGTAGTTGTAGAGAAGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGACAGAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCAGCTTCAGCAGCATTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCCGATTCTTCTTCGTCACCGATTTTTCTAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAAGTCCCTTCAAGATCATTTCCATCTGTTATGCAAAAACAGTTGGAGAATCAAAAGATTGTGAATCAAAAGAGACCTGTATTCGAGATTGACACGCCGAAGGCAAGAAAGAATAGTTTATTTGTTGAGAGGGCTAATAGCGAGAAACAAAAGACTCTGAGGGAAATTCTCGAAACTACTCATTACAATGGATTGTTGAAGAATAGTCCTATTAGAGAGCACAAGCTTCATAATCATGTTCATCATTCGGATGATCTTGATTACCAAAAGTTTGATGATTTACCACCGATTGTGCTCATGAAACCTCGGCGCGCTACATATCAAGAATTTGTAGAAACTTATGAGCCGATTCGTCAGGAAGATTTCTCGTTTAGAAATCTAAAAGAGAAAACAGTCTCTTCAAAAACCTTCAAGCCCAGAGAAGGTTCGGCTACAAATATGAGAAAAGACGTGGAAGAAAATCTATCCAAAAGGATTTTCAAAGAAGAAAGACCGAAGCGTGTAAAAGAGGTTATGGaatttgatgtgaaagaaatCAAACCAGTCGAAAACAAGAAGGTTCAAAAAGTTAGTCACAGATTACAAGCAAGTGAAAAAGTCAATGAAAAAGTTAAGGTAAAGCCTATTAATATTAGCAGAAAGCCAGTAGAAAAGGATGTTTCAAAAGCTAAAGTTGTAACGAAAGCTCAAGATCAAGGAGAAATCAAGTCTAGTAGTGAAAAGTTGAGGAAGCCGAGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATACAAAAAAGGAActtcttcaaattcaaatatcatCACAAAACCAAAGACACAAAAAGTTAATAACTCAAAGGAATTGAGAAAAAGTCCGATGAAGAAGCAAAGGTCTGTCGATGAGGCTGAAGCAACTAAACCACTTGATGAACAATTAAGGGAAGAAGAGGGAATGAGTATGAATGTTTCGTGTAAAGATGAGTGCACTGAGATTAAAATAATCACTACAATAACAGAAGATCTCATCATGGAGCATGAAGAAGTTGACACCTATGCAAATAAGACTAAAGATAATTGTGAGGCGGACCTTCATAATTCTTCAAGTGACGATGTTTTGATGATAAATTGTGAACATGAAAATGATACTGTCTCAGCCGAGGAAGCTCTTGATACCACCAGCATCAGTGAAACTGGTTTCAAGCAAGACAAAGACATCGATGACACCACGAGTATCAGTGAAACCGAATTCCAGCCTGACAAAGACACTTCTGAGCTGAAATATTTGCTTCTAACAAGTAAATCATTTATTGACCATGCAGATGAGCTTCTCAATCTTGATGTTGATTATCCTAAGATCATACCAAAGATTGAAACTAATGGAATAGCCAATACAAAACTCTATTTGGATTGTGCAAATGAACTCGCCGAACGAAAAAGTCTTCAAGAGTCATCACAAGTAGTTCACCCTTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATATCTTTGAGCAGCTTAGTTGAAGAAGTGAACAATGCAATTGAGAATTTGACATCTTATAGTGAAAATTCTGAGACTAAACTTATTCTGGATAGTGTTTGTGCAATGTTGGAGAGAGATATGAATTGCAACAATAGATTGATGAATGGAATATGGAACTGTGGTTGGAGGCATGGATTTTCTTCTGATGAAGTTGAGCAAGTTATTCATGAAGTAGAAAACATGGTTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA 2511 0.3664 MYKPFVTCDDPKGVVECGSIRRYKSNSNKMKDKTKSRKTVENLETNKQDKEAKVSSKGSTERGFDPSSLQLVKVSRGAEKLNNMIESWSRGLRYGGKSEDIAKDLLKGALDLQESLEMLQKVQEVSNNMARSKKKQDEERERSRIDAKMNDGIRTMHSNHFVEHNSASAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSSSPIFLRKEKSTNLVAKLMGLEQVPSRSFPSVMQKQLENQKIVNQKRPVFEIDTPKARKNSLFVERANSEKQKTLREILETTHYNGLLKNSPIREHKLHNHVHHSDDLDYQKFDDLPPIVLMKPRRATYQEFVETYEPIRQEDFSFRNLKEKTVSSKTFKPREGSATNMRKDVEENLSKRIFKEERPKRVKEVMEFDVKEIKPVENKKVQKVSHRLQASEKVNEKVKVKPINISRKPVEKDVSKAKVVTKAQDQGEIKSSSEKLRKPRSVSRIEKNEIPYKKGTSSNSNIITKPKTQKVNNSKELRKSPMKKQRSVDEAEATKPLDEQLREEEGMSMNVSCKDECTEIKIITTITEDLIMEHEEVDTYANKTKDNCEADLHNSSSDDVLMINCEHENDTVSAEEALDTTSISETGFKQDKDIDDTTSISETEFQPDKDTSELKYLLLTSKSFIDHADELLNLDVDYPKIIPKIETNGIANTKLYLDCANELAERKSLQESSQVVHPLLLTCVGNSRLQISLSSLVEEVNNAIENLTSYSENSETKLILDSVCAMLERDMNCNNRLMNGIWNCGWRHGFSSDEVEQVIHEVENMVLGGLIEEIIVNL 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03363 836 PANTHER OS01G0228800 PROTEIN-RELATED 1 834 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 529 554 - -
Tsu03g03363 836 Coils Coil 751 771 - -
Tsu03g03363 836 Coils Coil 33 53 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 23 68 - -
Tsu03g03363 836 Coils Coil 122 142 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 470 554 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 486 509 - -
Tsu03g03363 836 PANTHER OS01G0228800 PROTEIN 1 834 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 510 528 - -
Tsu03g03363 836 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03363 Tsu-Chr3 46369982 46374573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03363 626 833 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 26.549 1.30e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03363 - - gmx:102663636 923.309