Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03353 ATGACAATCTTGGACATGGGACTTTCGTTGCTGGTGTTGTTGCCGGTATGGATGCCGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGCCTATTGCAGGTGTCATATACCTCTTGGTTCCTTGATGCCTTTAACTATGCAATTGCAACCAATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTTGAAAAGATATGGGAGATAACAGCCAATAACATAATAATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGCGGTATTGACTATAGTGACCATATAGCTTCCTTTTCCTCACGTGGCATGAGTACCTGGGAACTTCCACATGGTTATGGCCGTGTGAAGCCAGACGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGGACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTACTTGTCAGTGTCATTCCTGAACCTGATCGCAAAAATCTCTTAAACCCAGCAAGCATGAAACAAGCTTTGGTCGAGGGTGCTGCAAAGCTTGCTGGGCCTAACATGTACGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGGTACAAACCAAGGGCAAGCATCTTTCCCAGTCTTCTTGATTACTCGGATTGTCCTTATGCATGGCCATTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTTTAAATGGAATGGGTGTTATTGGCTACGTCGAAAGTCCACCAATATGGCATCCTTTTGAAGAAGTAGGAAATCTTCTAAGCATTCATTTTACATATTCTGAGATCATCTGGCCTTGGACTGGTTATTTGGCCATTCATTTACAAATCAAGGAAGAAGGTGCACAATTTTCCGGTAACATTGAAGGTAATGTGACTCTTAGGGTTTCCAGCCCTCCAGCTCAAGGAGAAAGGCACCCTCGAATTAGCACATGTGTGCTTCAATTGAAGTTAAAAGTGGTGCCAACACCGCCACGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCCCCAGGTTATATTCCCAGAGATTCGTTGGATGTTCGTAATGACATTCTTGACTGGCACGGGGATCATCTACATACAAATTTTCACATAATGTTCAACATGTTACGAGACACTGGTTACTATGTTGAAACACTTGGTTCTCCTCTTACTTGCTTTGATGCTCGACACTATGGAACACTTCTTTTGGTCGATCTTGAAGAAGAGTACTTTCCCGAGGAGATTGAAAAGTTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCTGTCTTTGCTGAGTGGTACAATGTAGATACCATGGTAAAGATGAGATTCTTTGATGATAATACCCGGAGTTGGTGGACCCCTGTCACTGGAGGTGCTAATAATCCTGCTCTTAATGATCTTTTGGCTCCATTTGGAATTGCTTTTGGAGATAAGATTCTGAGCGGTGATTTTTCACTTTTCGGTGAGGAGAATCGATATGCATCTGGAACTGATATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTCGGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGTTGCTTACTTCTAGCACCACCAAGGCAGATTCTCCAATTCTTGGTCTTACAGTGATGGGTGAAGGTCGCATTGCTGTGTATGGTGACTCCAACTGTTTGGACAGCAGCCATATGGTGACTAACTGTTTTACACTTCTGAGGAAAATGCTAGATTTTACTAGTGAGAATGTTAGAGATCCAGTGCTTTTCtctaaatcaaataaacaaGTCGCTCCCTTATATGAAGACGACAATCAGTTACCATCTCGCAGAACTGATGTAAATTTCTCTTCATATTCAGCTGTCGTGGGGAAGGACTTGATTTGCAGGACTGACTCAAGGTTCGAAATATGGGGAACTAAGGGCTACATTTTGCAAGTGAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTCATTGATCTCGGGAATGGTTTAAATTCAACCTTTGATGCTTCTAACATTAGGCGTCGAAAGGTAACTTTGAGAAATAAGGACGACTCTCTTGGGAATAGATATTTGGGCCTGTTCTATGGAGATGAGCCTGATGCACCTATGTTGGTCGGTAGTCACTGGCTTATTCCTGCTGTTGTTGCAGCAACTGGTATTTTACTATTGAGTTTTTGGCGCATTCGCCAAAAGAGACGTCGAAGAAGAAAAGGATCATCAAGCTCTGGTAGATTGACCAATTTATAG 2418 0.4231 MTILDMGLSLLVLLPVWMPSALVLHQIQRFMHFVCSLMHSLLQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNLLNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKRYKPRASIFPSLLDYSDCPYAWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPIWHPFEEVGNLLSIHFTYSEIIWPWTGYLAIHLQIKEEGAQFSGNIEGNVTLRVSSPPAQGERHPRISTCVLQLKLKVVPTPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDTGYYVETLGSPLTCFDARHYGTLLLVDLEEEYFPEEIEKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFPFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFTLLRKMLDFTSENVRDPVLFSKSNKQVAPLYEDDNQLPSRRTDVNFSSYSAVVGKDLICRTDSRFEIWGTKGYILQVRGRNRRLPGYPVIDLGNGLNSTFDASNIRRRKVTLRNKDDSLGNRYLGLFYGDEPDAPMLVGSHWLIPAVVAATGILLLSFWRIRQKRRRRRKGSSSSGRLTNL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03353 805 ProSiteProfiles Serine proteases, subtilase domain profile. 1 239 - -
Tsu03g03353 805 Gene3D Peptidase S8/S53 domain 35 246 IPR036852 GO:0004252|GO:0006508
Tsu03g03353 805 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 556 718 - -
Tsu03g03353 805 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 43 527 - -
Tsu03g03353 805 SUPERFAMILY Subtilisin-like 44 232 IPR036852 GO:0004252|GO:0006508
Tsu03g03353 805 PANTHER PEPTIDASE S8 556 718 - -
Tsu03g03353 805 PANTHER PEPTIDASE S8 43 527 - -
Tsu03g03353 805 Pfam Subtilase family 46 220 IPR000209 GO:0006508|GO:0008236
Tsu03g03353 805 ProSitePatterns Serine proteases, subtilase family, serine active site. 173 183 IPR023828 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03353 1 783 Subtilisin-like Serine Gene Family AT5G19660 77.975 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03353 K08653 - gmx:100819188 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03353 03 46280713 46286680 Tsu03g03353 03 46280713 46286680 ECH