Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03331 ATGACAGGAAGTACTATTGGTGGAGAAGATTTTCTTCGAAATATGATGTGTCATCTCTTACCTGATTCTGAAAGGATATTCAAGAGACAATTTCACTGGAACTCAGATATTATATCGATGGCTATTCTTCGAAGTAGAATCAATGACATGATTACTAAGCTTTCGTCTGAAACAAGTGTTGAGGTTGACTTAAAGTCGGTAGAAGGTTTGAAGATACAAAGGGTTGTAACGCGGAAGGAGTTTGAGGATGTAAACAAAGATGTGTTTGAGAAGTGTGAAAACCTAATCATCGAATGCTTGAAAGATGCGAAGATAGAAGCCGAGAATATAAATGATGTGATAATTGTAGGCGGATGTTGCAATATACCGAGGGTGGAGAATCTTGTTACTAACCTATGCAACGGAAAGGACATTTATAAAGATGTGAATTGTTCGAATGCTGTACTTGGTGGTGCAGCAGTGGCAGGAGTTGTTGTCGAGGCCTCTGATGACGCAGACTTGTTTACTTCTCAAAACACATCAGTGCCGACGTGGAAAAGGGTTATTTCAGCTGTTGATGATAATCAAACTACGGCATCGATTGTTATCTACGAAGGCGGTGCGGAGGGACAACTGGCTGAAGAAAACAATGTTTTGGGAAATTTGGAAATAACTGAAATACCTGAAGCACCAAAAGGGGTTCATAAAATCACTGTTTCGATGACAATAGACCATAAAAATAGGTTGAGAGTTACTGCTTCTGTTGCAATACCAAGATATGATCAACAATCTGCAATTCCTATTATTGAAGAAAGGATGATAAAGTTTGATGATCAGTTTCTAATTCAAACAAAGTTTGATGATAAAATAGATTTGGTTAGTCTCTTGAATGTGGAACAATAA 882 0.3787 MTGSTIGGEDFLRNMMCHLLPDSERIFKRQFHWNSDIISMAILRSRINDMITKLSSETSVEVDLKSVEGLKIQRVVTRKEFEDVNKDVFEKCENLIIECLKDAKIEAENINDVIIVGGCCNIPRVENLVTNLCNGKDIYKDVNCSNAVLGGAAVAGVVVEASDDADLFTSQNTSVPTWKRVISAVDDNQTTASIVIYEGGAEGQLAEENNVLGNLEITEIPEAPKGVHKITVSMTIDHKNRLRVTASVAIPRYDQQSAIPIIEERMIKFDDQFLIQTKFDDKIDLVSLLNVEQ 293
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03331 293 Gene3D Actin; Chain A, domain 4 8 91 - -
Tsu03g03331 293 Gene3D - 140 155 - -
Tsu03g03331 293 PANTHER HEAT SHOCK PROTEIN 70KDA 170 271 IPR013126 GO:0005524|GO:0140662
Tsu03g03331 293 PANTHER HEAT SHOCK PROTEIN 70KDA 1 173 IPR013126 GO:0005524|GO:0140662
Tsu03g03331 293 Pfam Hsp70 protein 5 163 IPR013126 GO:0005524|GO:0140662
Tsu03g03331 293 Pfam Hsp70 protein 169 259 IPR013126 GO:0005524|GO:0140662
Tsu03g03331 293 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 1 173 - -
Tsu03g03331 293 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 170 271 - -
Tsu03g03331 293 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 167 255 IPR029047 -
Tsu03g03331 293 Gene3D - 4 139 - -
Tsu03g03331 293 PRINTS 70kDa heat shock protein signature 110 126 - -
Tsu03g03331 293 PRINTS 70kDa heat shock protein signature 142 162 - -
Tsu03g03331 293 PRINTS 70kDa heat shock protein signature 227 243 - -
Tsu03g03331 293 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 157 273 IPR029047 -
Tsu03g03331 293 SUPERFAMILY Actin-like ATPase domain 3 157 IPR043129 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu03g03331 Tsu-Chr3 46045355 46046300 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03331 6 246 Calmodulin-binding Proteins AT3G12580 32.463 1.12e-37 139
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03331 K09489 - gmx:100809773 240.736