Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu03g03331 | ATGACAGGAAGTACTATTGGTGGAGAAGATTTTCTTCGAAATATGATGTGTCATCTCTTACCTGATTCTGAAAGGATATTCAAGAGACAATTTCACTGGAACTCAGATATTATATCGATGGCTATTCTTCGAAGTAGAATCAATGACATGATTACTAAGCTTTCGTCTGAAACAAGTGTTGAGGTTGACTTAAAGTCGGTAGAAGGTTTGAAGATACAAAGGGTTGTAACGCGGAAGGAGTTTGAGGATGTAAACAAAGATGTGTTTGAGAAGTGTGAAAACCTAATCATCGAATGCTTGAAAGATGCGAAGATAGAAGCCGAGAATATAAATGATGTGATAATTGTAGGCGGATGTTGCAATATACCGAGGGTGGAGAATCTTGTTACTAACCTATGCAACGGAAAGGACATTTATAAAGATGTGAATTGTTCGAATGCTGTACTTGGTGGTGCAGCAGTGGCAGGAGTTGTTGTCGAGGCCTCTGATGACGCAGACTTGTTTACTTCTCAAAACACATCAGTGCCGACGTGGAAAAGGGTTATTTCAGCTGTTGATGATAATCAAACTACGGCATCGATTGTTATCTACGAAGGCGGTGCGGAGGGACAACTGGCTGAAGAAAACAATGTTTTGGGAAATTTGGAAATAACTGAAATACCTGAAGCACCAAAAGGGGTTCATAAAATCACTGTTTCGATGACAATAGACCATAAAAATAGGTTGAGAGTTACTGCTTCTGTTGCAATACCAAGATATGATCAACAATCTGCAATTCCTATTATTGAAGAAAGGATGATAAAGTTTGATGATCAGTTTCTAATTCAAACAAAGTTTGATGATAAAATAGATTTGGTTAGTCTCTTGAATGTGGAACAATAA | 882 | 0.3787 | MTGSTIGGEDFLRNMMCHLLPDSERIFKRQFHWNSDIISMAILRSRINDMITKLSSETSVEVDLKSVEGLKIQRVVTRKEFEDVNKDVFEKCENLIIECLKDAKIEAENINDVIIVGGCCNIPRVENLVTNLCNGKDIYKDVNCSNAVLGGAAVAGVVVEASDDADLFTSQNTSVPTWKRVISAVDDNQTTASIVIYEGGAEGQLAEENNVLGNLEITEIPEAPKGVHKITVSMTIDHKNRLRVTASVAIPRYDQQSAIPIIEERMIKFDDQFLIQTKFDDKIDLVSLLNVEQ | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu03g03331 | 293 | Gene3D | Actin; Chain A, domain 4 | 8 | 91 | - | - | |
Tsu03g03331 | 293 | Gene3D | - | 140 | 155 | - | - | |
Tsu03g03331 | 293 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 170 | 271 | IPR013126 | GO:0005524|GO:0140662 | |
Tsu03g03331 | 293 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 173 | IPR013126 | GO:0005524|GO:0140662 | |
Tsu03g03331 | 293 | Pfam | Hsp70 protein | 5 | 163 | IPR013126 | GO:0005524|GO:0140662 | |
Tsu03g03331 | 293 | Pfam | Hsp70 protein | 169 | 259 | IPR013126 | GO:0005524|GO:0140662 | |
Tsu03g03331 | 293 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 1 | 173 | - | - | |
Tsu03g03331 | 293 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 8 | 170 | 271 | - | - | |
Tsu03g03331 | 293 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 167 | 255 | IPR029047 | - | |
Tsu03g03331 | 293 | Gene3D | - | 4 | 139 | - | - | |
Tsu03g03331 | 293 | PRINTS | 70kDa heat shock protein signature | 110 | 126 | - | - | |
Tsu03g03331 | 293 | PRINTS | 70kDa heat shock protein signature | 142 | 162 | - | - | |
Tsu03g03331 | 293 | PRINTS | 70kDa heat shock protein signature | 227 | 243 | - | - | |
Tsu03g03331 | 293 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 157 | 273 | IPR029047 | - | |
Tsu03g03331 | 293 | SUPERFAMILY | Actin-like ATPase domain | 3 | 157 | IPR043129 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu03g03331 | Tsu-Chr3 | 46045355 | 46046300 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu03g03331 | 6 | 246 | Calmodulin-binding Proteins | AT3G12580 | 32.463 | 1.12e-37 | 139 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu03g03331 | K09489 | - | gmx:100809773 | 240.736 |