Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu03g03315 | ATGCCGCGATCAAGTTCAGGAATTCATCATCAGCGTCAGAACTCTGATAATTTCATCCTTGATGCAAATTATCATGGAAGATGGTTTCAACCTTCAGCTTTTGCTCAGGAATTTGGAACTCGATCATCGAGCTTGAGGAAGAATGATGATGATCGTTTGTTCACTAGTGGCTTGCTTGACTTGCATTCGTTTGATACTGAGCTTTTACCTGAGGGACAATATTTTGATGACTCTGAGCCGATTTTCCCCGGGAACAAACTCGCGCCTAGGTCTCGGGGCTTGGCTGAGAGCAACGTTCTTAAAAGTTTTGCAGCAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCGGTTAGGAAGAGACCATTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACCATAGACTCAAATTCTCTCACAGTTCACGAAAGAAAACTTAAGGTTGACTTGACAGAATACGTCGAGAAACATGATTTCTTTTTTGATGCCGTGCTGGATGAAGATGTTTCAAATGGTGAAGTGTATGCTGAGACTGTGGAGCCCATAGTTCCGTTGATATTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGGAGTGGAAAGACTTATACTATGCAACCATTGCCTCTTAAAGCATCCCAAGATATTCTAAGACTAATGCACCACACATACCAGAACCAAGGTTTCCAATTATACGTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTTCTCAATGATAGAAAAAAACTTTTGATGAGGGAGGATGGTAGACAGCAAGTTTGCATTGTTGGCTTGCAAGAATACAGAGTTTTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCGTCTCGATCACATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTTTCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCAGATACTACTGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCATTAAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACCGAAGTGCTGCGAGACTCTTTTGTTGGTAACTCGCGGACTGTAATGATATCTTGCATTTCACCAAGCTCGGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCCTGTCAAAGGGTAATAGCTCCAGAAGGGATCCCCTTTCTTCATCAAACCATAGAGACTCAACTGTGTTGCCAGTTATACCTCATGATAATACTTTTGAGGATGAAACAACATATGTTTCTTCCAGTGAGAGGAATCAATTTGGATGGTCCAAACAGCCTGAAAGAGAACCCTCGCCTTCAAATAATGTGGACCGTGTTTCAAGTGGTAGGTTCGAGGGAAGTTTGGCACCTTCTGTGTACTCTGACCAACAAAGGGGTCAAAGAGGCATTCAAAATGGTAGAGCTGAAAAGGAAAATGATTACCTAGCACCAACATATGGACAAGACAGAACAAGAAAAACGATCAAGAGGGTGGATAACAACCAGTTATCTACAGTAGAAGACAAAAGGAAGACAGACTCTCGTGCTAAACATGTAAATCTATCACATGTTGAGAATACATATTCTGATCCCGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGATCTTGTAACTGCTCACCGTAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATCTACTCTTTCAAGCTGATCAACCAGGAAATCAATTGGATGATTATATTTCCAAATTGGATACCATTTTGTCTCAAAAGGCTGCAGGAATTTATCAATTGCAAGCACAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACATTTTCTCATCTTCTGGTGACTGA | 2034 | 0.4036 | MPRSSSGIHHQRQNSDNFILDANYHGRWFQPSAFAQEFGTRSSSLRKNDDDRLFTSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKLAPRSRGLAESNVLKSFAADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHDFFFDAVLDEDVSNGEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYQNQGFQLYVSFFEIYGGKLFDLLNDRKKLLMREDGRQQVCIVGLQEYRVFEVETIKQFIEKGNATRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNHRDSTVLPVIPHDNTFEDETTYVSSSERNQFGWSKQPEREPSPSNNVDRVSSGRFEGSLAPSVYSDQQRGQRGIQNGRAEKENDYLAPTYGQDRTRKTIKRVDNNQLSTVEDKRKTDSRAKHVNLSHVENTYSDPDDDFNALLKDEEDLVTAHRRQVEETVDIVREEMNLLFQADQPGNQLDDYISKLDTILSQKAAGIYQLQAQLAQFQRRLNEYNIFSSSGD | 677 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu03g03315 | 677 | MobiDBLite | consensus disorder prediction | 442 | 458 | - | - | |
Tsu03g03315 | 677 | PANTHER | KINESIN-LIKE PROTEIN | 40 | 675 | - | - | |
Tsu03g03315 | 677 | SMART | kinesin_4 | 113 | 444 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | ProSitePatterns | Kinesin motor domain signature. | 337 | 348 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Tsu03g03315 | 677 | MobiDBLite | consensus disorder prediction | 437 | 549 | - | - | |
Tsu03g03315 | 677 | PANTHER | KINESIN-RELATED PROTEIN 6 | 40 | 675 | - | - | |
Tsu03g03315 | 677 | ProSiteProfiles | Kinesin motor domain profile. | 115 | 438 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | Pfam | Kinesin motor domain | 121 | 437 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | MobiDBLite | consensus disorder prediction | 470 | 505 | - | - | |
Tsu03g03315 | 677 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 113 | 438 | IPR027417 | - | |
Tsu03g03315 | 677 | PRINTS | Kinesin heavy chain signature | 388 | 409 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | PRINTS | Kinesin heavy chain signature | 338 | 356 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | PRINTS | Kinesin heavy chain signature | 304 | 321 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | PRINTS | Kinesin heavy chain signature | 195 | 216 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Tsu03g03315 | 677 | CDD | KISc_KIF2_like | 115 | 436 | - | - | |
Tsu03g03315 | 677 | Gene3D | Kinesin motor domain | 95 | 441 | IPR036961 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu03g03315 | Tsu-Chr3 | 45844876 | 45851303 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu03g03315 | 114 | 438 | Calmodulin-binding Proteins | AT5G65930 | 35.224 | 1.97e-43 | 167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu03g03315 | K10393 | - | gmx:100775562 | 1094.34 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu03g03315 | 03 | 45844876 | 45851303 | Tsu03g03315 | 03 | 45844876 | 45851303 | ECH |