Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03315 ATGCCGCGATCAAGTTCAGGAATTCATCATCAGCGTCAGAACTCTGATAATTTCATCCTTGATGCAAATTATCATGGAAGATGGTTTCAACCTTCAGCTTTTGCTCAGGAATTTGGAACTCGATCATCGAGCTTGAGGAAGAATGATGATGATCGTTTGTTCACTAGTGGCTTGCTTGACTTGCATTCGTTTGATACTGAGCTTTTACCTGAGGGACAATATTTTGATGACTCTGAGCCGATTTTCCCCGGGAACAAACTCGCGCCTAGGTCTCGGGGCTTGGCTGAGAGCAACGTTCTTAAAAGTTTTGCAGCAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCGGTTAGGAAGAGACCATTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGATATTATTACCATAGACTCAAATTCTCTCACAGTTCACGAAAGAAAACTTAAGGTTGACTTGACAGAATACGTCGAGAAACATGATTTCTTTTTTGATGCCGTGCTGGATGAAGATGTTTCAAATGGTGAAGTGTATGCTGAGACTGTGGAGCCCATAGTTCCGTTGATATTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGGAGTGGAAAGACTTATACTATGCAACCATTGCCTCTTAAAGCATCCCAAGATATTCTAAGACTAATGCACCACACATACCAGAACCAAGGTTTCCAATTATACGTTAGTTTTTTCGAAATATATGGGGGGAAACTGTTTGATCTTCTCAATGATAGAAAAAAACTTTTGATGAGGGAGGATGGTAGACAGCAAGTTTGCATTGTTGGCTTGCAAGAATACAGAGTTTTTGAAGTTGAAACAATCAAGCAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCGTCTCGATCACATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTTTCTTTCATAGATCTGGCTGGAAGTGAACGCGGTGCAGATACTACTGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCATTAAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACCGAAGTGCTGCGAGACTCTTTTGTTGGTAACTCGCGGACTGTAATGATATCTTGCATTTCACCAAGCTCGGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGGGTAAAGAGCCTGTCAAAGGGTAATAGCTCCAGAAGGGATCCCCTTTCTTCATCAAACCATAGAGACTCAACTGTGTTGCCAGTTATACCTCATGATAATACTTTTGAGGATGAAACAACATATGTTTCTTCCAGTGAGAGGAATCAATTTGGATGGTCCAAACAGCCTGAAAGAGAACCCTCGCCTTCAAATAATGTGGACCGTGTTTCAAGTGGTAGGTTCGAGGGAAGTTTGGCACCTTCTGTGTACTCTGACCAACAAAGGGGTCAAAGAGGCATTCAAAATGGTAGAGCTGAAAAGGAAAATGATTACCTAGCACCAACATATGGACAAGACAGAACAAGAAAAACGATCAAGAGGGTGGATAACAACCAGTTATCTACAGTAGAAGACAAAAGGAAGACAGACTCTCGTGCTAAACATGTAAATCTATCACATGTTGAGAATACATATTCTGATCCCGATGATGATTTTAATGCTCTGCTGAAGGATGAGGAAGATCTTGTAACTGCTCACCGTAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATCTACTCTTTCAAGCTGATCAACCAGGAAATCAATTGGATGATTATATTTCCAAATTGGATACCATTTTGTCTCAAAAGGCTGCAGGAATTTATCAATTGCAAGCACAGTTGGCTCAATTCCAGAGACGTTTAAATGAGTACAACATTTTCTCATCTTCTGGTGACTGA 2034 0.4036 MPRSSSGIHHQRQNSDNFILDANYHGRWFQPSAFAQEFGTRSSSLRKNDDDRLFTSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKLAPRSRGLAESNVLKSFAADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHDFFFDAVLDEDVSNGEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYQNQGFQLYVSFFEIYGGKLFDLLNDRKKLLMREDGRQQVCIVGLQEYRVFEVETIKQFIEKGNATRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNHRDSTVLPVIPHDNTFEDETTYVSSSERNQFGWSKQPEREPSPSNNVDRVSSGRFEGSLAPSVYSDQQRGQRGIQNGRAEKENDYLAPTYGQDRTRKTIKRVDNNQLSTVEDKRKTDSRAKHVNLSHVENTYSDPDDDFNALLKDEEDLVTAHRRQVEETVDIVREEMNLLFQADQPGNQLDDYISKLDTILSQKAAGIYQLQAQLAQFQRRLNEYNIFSSSGD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03315 677 MobiDBLite consensus disorder prediction 442 458 - -
Tsu03g03315 677 PANTHER KINESIN-LIKE PROTEIN 40 675 - -
Tsu03g03315 677 SMART kinesin_4 113 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu03g03315 677 MobiDBLite consensus disorder prediction 437 549 - -
Tsu03g03315 677 PANTHER KINESIN-RELATED PROTEIN 6 40 675 - -
Tsu03g03315 677 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 MobiDBLite consensus disorder prediction 470 505 - -
Tsu03g03315 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 438 IPR027417 -
Tsu03g03315 677 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03315 677 CDD KISc_KIF2_like 115 436 - -
Tsu03g03315 677 Gene3D Kinesin motor domain 95 441 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03315 Tsu-Chr3 45844876 45851303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03315 114 438 Calmodulin-binding Proteins AT5G65930 35.224 1.97e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03315 K10393 - gmx:100775562 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03315 03 45844876 45851303 Tsu03g03315 03 45844876 45851303 ECH