Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03308 atgttcaaattcCTTAAAGAAGTTGTTGGTGGATCTGGAACTGGTATCAAAGATCTTCCATATAATATCGGTGAACCTTATCCTTCTGCTTGGGGCTCTTGGCTACATCATCGCGGTACATCTAAGGATGATGGTTCACCGGTTTCGATTTTTTCATTATCCGGAAGCAATGCACAGGATGGACATTTAGCTGCTGGTCGTAATGGTGTCAAGCGTCTACGAACCGTTAGGCATCCAAATATTTTGTCGTTTCTTCATAGTACCGAGATCGAAACTTTTGATGGTGGTTCTTCTAAGGTTACAATTTATATTGTGACTGAACCTGTAATGCCACTTTCAGATAAGATTAAGGAGTTAGGTCTTGATGGTACACAAAGGGATGAATATTATGCTTGGGGACTGCATCAGATAGCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTGACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGTAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACACAGTACAAATCAATGGAGCTGGCAAAATCCGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTAATCTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAGGAGTTACGCAACACTGCATCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTCAGTTCCACACCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGagtattttcaaaataagttGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGCGTTGAGAAGGACACTTTCTTCCGCAAACTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTCCGTACCAAgGTTCTACCAACAATAATTAAACTCTTTGCCTCCAATGATCGAGCTGTCCGTGTCAGCCTTCTCCAACATATTGATCAATACGGAGAATCATTATCAGCTCAAGCTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAGCTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTATCGAAGTTACAGGTTGATGAAGAGCCAGCAATACGAACAAATACAACTATCTTGCTAGGAAATATTGCAAGCTACTTAAACGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCAACTATGACATCACTGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCCAAGGCATTTCAAGCTGTTGATCAATTTTTGCAGATGGCAAAGCAACATTATGAAAAGACAAATATAGAGACTACTGGAGGTGCAGGAATGGAAAGTTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTGAAGGGAAAATCTTCTGATCATGCTCCAGTTCCTTCTGTGAGTTCTACTGCCCTCACACCAACATCTTCTAATGCCAGCTCAGTTGCAGATACTCCTTCGACAGCACCTATCCGTGTAAATTCCACACCAGATTTCACTGAGCACCATACCCCTACATCTCCTACATCAACGGATGGCTGGGGAGAGCTAGAGAATGGAATCGATGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATCTAGAACCACTTGAAGAAACAAATCCAACTCCAGCTCTTACTAACATTCAAGCAGCTCAAAGGCGGCCAGTTGCTCAACCTGCTTCACATGTAAAAGGTATTAATCATTGA 2124 0.4181 MFKFLKEVVGGSGTGIKDLPYNIGEPYPSAWGSWLHHRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKIKELGLDGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKSMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRTKVLPTIIKLFASNDRAVRVSLLQHIDQYGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDITEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMAKQHYEKTNIETTGGAGMESSSIPGNASLLGWAMSSLTLKGKSSDHAPVPSVSSTALTPTSSNASSVADTPSTAPIRVNSTPDFTEHHTPTSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEETNPTPALTNIQAAQRRPVAQPASHVKGINH 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03308 707 MobiDBLite consensus disorder prediction 654 674 - -
Tsu03g03308 707 Gene3D Transferase(Phosphotransferase) domain 1 110 279 - -
Tsu03g03308 707 MobiDBLite consensus disorder prediction 592 707 - -
Tsu03g03308 707 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03308 707 PANTHER - 1 698 - -
Tsu03g03308 707 Pfam Protein tyrosine and serine/threonine kinase 59 237 IPR001245 GO:0004672|GO:0006468
Tsu03g03308 707 Gene3D - 282 561 IPR011989 -
Tsu03g03308 707 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 698 - -
Tsu03g03308 707 MobiDBLite consensus disorder prediction 679 693 - -
Tsu03g03308 707 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Tsu03g03308 707 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Tsu03g03308 707 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03308 707 MobiDBLite consensus disorder prediction 592 651 - -
Tsu03g03308 707 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Tsu03g03308 707 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03308 70 291 MAP Kinase Kinase Kinase AT5G66850 23.932 1.35e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Tsu03g03308 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03308 K08876 - gmx:100792884 1217.99