Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03301 ATGTCACTTTTGGCAAAATGGCGTTGGAGGATGCTCGGGGAAGATGATTTGTTGTGGAAAAGGGTGTTGGAGGCTAGATATGGTGTTGTTGCATGTCCAAAATTGACGATCGGACGTATGGTGGGATTAGGGGAGGAACGAGGAAGGGTGGGGGATTGGATTCTTGATGTGTTTAAAAAGAAGTTGGGTAATGGAGGTTCCACTAGATTTTGGCTTGATCATTGGGTTGGTGTAGCTCCGTTGAAAGAGGTTTTCCCGCGTCTTTATAGTATTTCTTTACAAATGGATCTCACAATTCAAGAAATGGGAGAATGGGGACAACAATCTTTGGCGGTGGTGGCACAAGTTTGGGAGAGTTGGGCTTCATCCAAGGTGATTATCTTTTCTTGGCAAGCTCTCCTTGGTCGATTGGCAACTAGAGATAATCTAGCTCGTAGAGGTATAATACCATTGGGAGTGGGGACACTGTGTCCGTGGTGTGATGGAGATATTGAGTCAGAAAATCATCTTCTTGTTACTTGTCCGCTTGCTTGGGTCGTGTGGTCATTGGTTCATAAGTGGTTTGGGatgGCTGCAAAAATAATGGGTATACGCGCAGAATGCCTAGAAGAAAATTTTGAGAATATCAAGCTTCTTAAGGAAGCTATTCTAAATCTTTATTCTCGTGTGGAAGAGAAAGGGAAAATGAATGATCTTCTCGTGCATGCATCGCAATGTCGTTCACGTTGCAGTTTTCCTAATTGTTTCAAAGTGAAGAGCCTCTTCTGCCATGGTATGGACTGCGAAACACGTGCTTCAGGAGGCTGTGTTCTATGCAAGAAAATGTGGTATTTGATTCAATTGCATGCTCGTGCATGCAACAAATCGGAGTGCAATATGCCGCGATGCAGTGATGTCAAAGAACATCTAAGGAGGCAGCAGTGA 924 0.4394 MSLLAKWRWRMLGEDDLLWKRVLEARYGVVACPKLTIGRMVGLGEERGRVGDWILDVFKKKLGNGGSTRFWLDHWVGVAPLKEVFPRLYSISLQMDLTIQEMGEWGQQSLAVVAQVWESWASSKVIIFSWQALLGRLATRDNLARRGIIPLGVGTLCPWCDGDIESENHLLVTCPLAWVVWSLVHKWFGMAAKIMGIRAECLEENFENIKLLKEAILNLYSRVEEKGKMNDLLVHASQCRSRCSFPNCFKVKSLFCHGMDCETRASGGCVLCKKMWYLIQLHARACNKSECNMPRCSDVKEHLRRQQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03301 307 ProSiteProfiles Zinc finger TAZ-type profile. 219 299 IPR000197 -
Tsu03g03301 307 PANTHER HISTONE ACETYLTRANSFERASE HAC12 221 306 - -
Tsu03g03301 307 SUPERFAMILY TAZ domain 228 305 IPR035898 -
Tsu03g03301 307 Pfam TAZ zinc finger 231 296 IPR000197 -
Tsu03g03301 307 Gene3D TAZ domain 220 307 IPR035898 -
Tsu03g03301 307 PANTHER CBP/P300-RELATED 221 306 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu03g03301 307 Pfam zinc-binding in reverse transcriptase 110 181 IPR026960 -
Tsu03g03301 307 SMART TAZ_2 220 297 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03301 Tsu-Chr3 45644752 45647252 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu03g03301 zf-TAZ 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03301 K04498 - qsu:112034234 142.895