Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03289 ATGAAGGCTGGTATTCCAGATGGAGTGATCAATGCACTACCAGGATTTGGTTCAACTGCTGGAACTGCAATATCTTCACATATGGACATTGATGCAGTAAGTTTTACAGGATCAACCGAAACAGGTCGTCAAGTAATGCAGGCTGCGGCAATGAGCAATTTGAAGCTGGTATCGCTTGAATTAGGAGGAAAGTCACCTCCAATCATTGAACCAATCGAATCATACTCAAAAACTTCCTTTGGATTCTAA 249 0.4177 MKAGIPDGVINALPGFGSTAGTAISSHMDIDAVSFTGSTETGRQVMQAAAMSNLKLVSLELGGKSPPIIEPIESYSKTSFGF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03289 82 Pfam Aldehyde dehydrogenase family 2 70 IPR015590 GO:0016491
Tsu03g03289 82 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 69 - -
Tsu03g03289 82 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 2 69 - -
Tsu03g03289 82 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 59 66 IPR029510 GO:0016491
Tsu03g03289 82 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 80 IPR016162 GO:0016491
Tsu03g03289 82 SUPERFAMILY ALDH-like 2 70 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03289 Tsu-Chr3 45498574 45500370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03289 2 69 Aldehyde Dehydrogenase Gene Family AT3G24503 75.000 1.84e-29 107