Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03288 ATGGCAAATCTCATCTTAGACTCATCCTTTGTAAAGATTCCAACTATAAAGTTTAAAAAGCTTTTCATCAATGGAGAATTTGTGGACTCAGTTTCAGGAAAAACGTTTGAAACTGTTGATCCAAGAACAGAGGAAGTGATTACAAAAATAGCAGAAGCTACAAAAGAAGATGTTGATATTGCAGTGAAAGCTGCTCGTGAAGCATTTGATTTTGGTCCATGGCCACGTATGCCTGGTGCTGAAAGAGCAAAGATTATGATGAAATGGGCAGGACTAATTGAACAAAACATAGAAGAACTAGCAGCATTAGATACAATTGATGGTGGAAAGCTATATAGTTGGTGTAAGACAGTTGATGTACCTGAATCAGCCAATATCCTACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAAGTCTTCAAAACTTCTAGGAATCTTCATTTGTATACTTTGATGGAACCTATTGGTGTTGTTGGACACATTATACCTTGGAATGTTCCTAGTGTTATGTTCTTTGCTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGGTTCTTAAGCCTGCCGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTTGCTAAGGAGGCTGGTATTCCAGATGGAGTGATCAATGTACTACCAGGATTTGGTTCAACTGCTGGAGCTGCAATATCTTCACATATGGACATTGATGCAgTAAGTTTTACAGGTTCAACCGAAACAGGCCGTCGAGTAATGCAGGCTGCGGCAATGAGCAATTTGAAGCCGGTATCGCTTGAATTAGGAGGAAAATCACCTGTCTTAGTTTTTGATGATGCTGATGTTGATAAAGCTGTTGATCTTGCTCTATTTGGTATCCTACACAATAAGGGAGAAATATGTGTTGCATTTTCTAGAGTTTTTGTGCAAGAAGGAATTTATGATGAATTTGAGAAGAAAGTGGTGGAAAAGGCAAAAAATTGGGTAGTTGGTGACCCTTTTCATCCTAAAGTTCAACAAGGACCACAAACAAGTAAGGTACAATTTGATAAAATTCTTTCCTATATTGATCATGGAAAAAATGAAGGAGCTACACTATTAACTGGTGGTAAGAAAATAGGCAACAAAGGATACTACATTGAGCCTACTATTTTTACCAATGTTAAGGATGACATGCTAATAGCACAAGATGAAATATTTGGACCTGTGATGGCACTTTCTAAGTTCAAGACAATTGAGGAAGCAATTAAGAAGGCAAACAATACAAAATATGGCCTAGCAGCAGGGATTGTGACAAAAGATTTGGACATAGCAAATACTGTCTCAAGGTCAATCCGTGCAGGCATCATTTGGATCAATTGTTACTTTGCCTTTGATACTGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGATTGGATGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTTTGA 1500 0.3813 MANLILDSSFVKIPTIKFKKLFINGEFVDSVSGKTFETVDPRTEEVITKIAEATKEDVDIAVKAAREAFDFGPWPRMPGAERAKIMMKWAGLIEQNIEELAALDTIDGGKLYSWCKTVDVPESANILRYYAGAADKIHGEVFKTSRNLHLYTLMEPIGVVGHIIPWNVPSVMFFAKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKEAGIPDGVINVLPGFGSTAGAAISSHMDIDAVSFTGSTETGRRVMQAAAMSNLKPVSLELGGKSPVLVFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKAKNWVVGDPFHPKVQQGPQTSKVQFDKILSYIDHGKNEGATLLTGGKKIGNKGYYIEPTIFTNVKDDMLIAQDEIFGPVMALSKFKTIEEAIKKANNTKYGLAAGIVTKDLDIANTVSRSIRAGIIWINCYFAFDTDCPFGGYKMSGFGRDYGLDALHKYLQVKSVATPIYNSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03288 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Tsu03g03288 499 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 8 499 - -
Tsu03g03288 499 SUPERFAMILY ALDH-like 9 495 IPR016161 GO:0016491
Tsu03g03288 499 Pfam Aldehyde dehydrogenase family 27 489 IPR015590 GO:0016491
Tsu03g03288 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 499 - -
Tsu03g03288 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Tsu03g03288 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Tsu03g03288 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03288 Tsu-Chr3 45492296 45497093 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03288 8 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.994 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03288 K12355 - gmx:100784449 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00195 02 1669019 1675546 Tsu03g03288 03 45492296 45497093 PCT