Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03285 ATGGGTCCATGGCCTCGTATGCCCGGTGTTGCAAGAGCAAAAATCTTGACGAAATGGGCAGACTTAATTGAACAAAACATCGAAGAAATAGCAGCATTAGATACAATAGATGCTGGAAAATTGTACAGTTTCTGTAAAGCTTTTGACATTCCGGGAGTTGCAAGTACAATACGTTACTATGCCGGTGCTGCTGATAAGATTCATGGCGAGGTATTAAAACCTGCTCGGGAGTTGCACGCATATACTTTGATGGAACCAATTGGCGTTGTTGGACACATTATTCCTTGGAATTTTCCTAGTACTATGTTTGCTACTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACAATGGTTCTTAAGCCAGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTTGCTAAGGAGGCTGGAATTCCAGATGGAGTACTCAATGTAGTACCTGGATTTGGTCAAACTGCAGGAGCAGCAATAAGCTCACATATGGACATTGATAAGGTTAGTTTTACCGGTTCGACCGAAGTAGGACGTGAAGTAATGATATCGGCAGCAAGAAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGAAAATCACCCATCTTAATATTCGACGATGCTGATGTTGATAAAGCTGCTGAGCTTGCTCTCTTAGGCATCCTATTTAAtaagGGAGAAATTTGTGTTGCGGGTTCTCGTGTGTTTGTTCAAGAAGGAATCTACGATGAATTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGATTGTTGGTGATCCTTTTGATCCTAAAGTTCAGCAAGGACCTCAGgttgacaagaagcaatttgaaaaaattctTTCCTATATTGAGCATGGAAAGAAAGATGGAGCAACCCTTTTGACAGGTGGTAAGAGAGTTGGAAACAAGGGTTACTACTTAGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTTATAGTACAAGATGAAATATTCGGCCCTGTCATGTCACTTATGAAGTTCAAGACAATTGAGGAAGCAATTAAAAGTGCAAACAATACAAGATATGGCTTAGCAGCAGGAATTGTGACAAAGAATTTAGACATAGCAAACACAGTGTCAAGGTCCATTAGAGCTGGAATTATTTGGATTAATTGCTACTTTGCCTTTGGAAATGACATTCCTTATGGAGGTTACAAGATGAGTGGTTTTGGAAGAGATTTTGGATTGGAATCATTACATAAGTACTTACAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1290 0.3899 MGPWPRMPGVARAKILTKWADLIEQNIEEIAALDTIDAGKLYSFCKAFDIPGVASTIRYYAGAADKIHGEVLKPARELHAYTLMEPIGVVGHIIPWNFPSTMFATKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKEAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVSFTGSTEVGREVMISAARSNLKPVSLELGGKSPILIFDDADVDKAAELALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWIVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKDGATLLTGGKRVGNKGYYLEPTIFSNVKEDMLIVQDEIFGPVMSLMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03285 429 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 201 390 IPR016163 GO:0016620
Tsu03g03285 429 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 419 IPR016162 GO:0016491
Tsu03g03285 429 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 195 202 IPR029510 GO:0016491
Tsu03g03285 429 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 223 234 IPR016160 GO:0016491
Tsu03g03285 429 Pfam Aldehyde dehydrogenase family 3 419 IPR015590 GO:0016491
Tsu03g03285 429 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 429 - -
Tsu03g03285 429 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 429 - -
Tsu03g03285 429 SUPERFAMILY ALDH-like 3 425 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03285 Tsu-Chr3 45436482 45444598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03285 2 429 Aldehyde Dehydrogenase Gene Family AT3G24503 73.193 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03285 K12355 - gmx:100791396 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00194 02 1649416 1655029 Tsu03g03285 03 45436482 45444598 PCT