Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03268 ATGATGAATAATTTGCTCTCACCATCAACCCTACCATTTACCATATGCGCCACATTCttgtttctcttctttctttattGGCTACGCAGAAGCAACAATACTAACGGTGTAGCTTCAAAGACACTCCCACCACCACCGCCAGAAGTCGGCAGTGCCTGGCCGTTAATCGGCCATCTCCACCTTTTAAGCGGTTCCGAGTCACCTCACGTCGTCTTGGGGAAGTTAGCCGATAAATACGGACCAATCTTCACCTTCCGTTTAGGTGTTCATCGAGCTTTAGTTATAAGTAATTATGAAATGGCAAAACAGTGTTTCACAGTAAACGACAAAGCATTTGCTTCACGTCCTAAATCTGTAGCATTTGAAATTCTAGGATATAACTTTTCCATGTTTGGTTTCAGTCCCTATGGTTCTTATTGGCGCACCATGCGGAAGATCGCAACCGTCCACGTTCTCAACACTCAACGAATAGAGATAATGCTTAAACACGTGATGGAATCTGAGGTGGAAACAGCAATGAAAGGTAGTTACGATTTTTGGCGGAAGATGAAAAACGAGGGTAATCCTAAAAGGGCAATTACGGAAATGAAAAAATGGTTTAGTGATATAGCTATAAATGTTATATTTAGAACGGTTTTAGGAAAACGTTTTGACGTTAATGATGAAGAGAATCAACGGATTAGAAAAGCACTTAGAGCCTTGTTTGATCTCACCGGTTCATTTGTTATATGTGACACGCTGCCGTATTTGAGATGGTTCGATTTGGATGGAAAAGAGAAAGAGATGAAGAAAACGGCGAAAGAGATGGATGATTTTGTTAGTGTTTTGCTTGATGAACACAAACATAATAGGAACTCTGGCGGCGAACATGACTTCATGGATATGCTCATCTCCACCGTTGATGATCATGATTTAGACGGTCGTGATTCTGACACCGCAATCAAAGCTACTTGTCTGGCTCTAATTCTAGCAGGCACAGACACAACATCAGGAACATTGACTTGGGGTCTCTCTTTACTTCTCAACAACCGTGAAGTCTTAAAAAAGGCCATTCAAGAATTAGATACACAAATTGGCATGGAAAATATGGCAATAAAAACAGATTTGACAAAGTTGAATTATCTCCAAGCCATTATCAAGGAAACATTGCGTTTGTACCCAGCCGCACCACTCAATATTCCTCATGAGTCCATCGAAGATTGTACTATTGGTGGATACCATGTGCCTGCTGGGACGCGTCTTTTAACCAACTTATCGAAAATTCAACGAGATCCAATGTTATACATGGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACTCACAAGGATATCGATGTCAAGGGTCAACATTTTGAGTTGATTCCATTTGGTTCGGGTAGAAGAATGTGCCCCGGAATCTCATTTGGTCttcaacttatgcaaataacaCTCGCTACTTTGTTGCATGGGTTTGATATAGTGACTCCAAATGAAGGACCAGCTGATATGGGTGAACAAAATGGCCTCACTACTATCAAAGCCACTCCACTTGAAGTCATTCTCACTCCACGTTTGTCTACCCAAGTTTTTAGTCAAAATCCATGA 1590 0.4057 MMNNLLSPSTLPFTICATFLFLFFLYWLRRSNNTNGVASKTLPPPPPEVGSAWPLIGHLHLLSGSESPHVVLGKLADKYGPIFTFRLGVHRALVISNYEMAKQCFTVNDKAFASRPKSVAFEILGYNFSMFGFSPYGSYWRTMRKIATVHVLNTQRIEIMLKHVMESEVETAMKGSYDFWRKMKNEGNPKRAITEMKKWFSDIAINVIFRTVLGKRFDVNDEENQRIRKALRALFDLTGSFVICDTLPYLRWFDLDGKEKEMKKTAKEMDDFVSVLLDEHKHNRNSGGEHDFMDMLISTVDDHDLDGRDSDTAIKATCLALILAGTDTTSGTLTWGLSLLLNNREVLKKAIQELDTQIGMENMAIKTDLTKLNYLQAIIKETLRLYPAAPLNIPHESIEDCTIGGYHVPAGTRLLTNLSKIQRDPMLYMDPLEFRPERFLTTHKDIDVKGQHFELIPFGSGRRMCPGISFGLQLMQITLATLLHGFDIVTPNEGPADMGEQNGLTTIKATPLEVILTPRLSTQVFSQNP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03268 529 Coils Coil 337 357 - -
Tsu03g03268 529 Pfam Cytochrome P450 47 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 SUPERFAMILY Cytochrome P450 47 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Tsu03g03268 529 PANTHER CYTOCHROME P450 82C3-RELATED 46 525 - -
Tsu03g03268 529 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 Gene3D Cytochrome P450 37 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PANTHER CYTOCHROME P450 46 525 - -
Tsu03g03268 529 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03268 529 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03268 Tsu-Chr3 45094678 45098380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03268 47 525 Cytochrome P450 AT4G31940 48.889 5.06e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03268 - - gmx:100778017 687.952